Force spectroscopy of chromatin fibers: Extracting energetics and structural information from Monte Carlo simulations

A Lattice Model for Transcription Factor Access to Nucleosomal DNA

(2010) Vladimir B. Teif et al.   BIOPHYSICAL JOURNAL

Exploring the Conformational Space of Chromatin Fibers and Their Stability by Numerical Dynamic Phase Diagrams

(2010) René Stehr et al.   BIOPHYSICAL JOURNAL

Chromatin Fiber Dynamics under Tension and Torsion

(2010) Christophe Lavelle et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Modeling Studies of Chromatin Fiber Structure as a Function of DNA Linker Length

(2010) Ognjen Perišić et al.   JOURNAL OF MOLECULAR BIOLOGY

Structure and binding of the H4 histone tail and the effects of lysine 16 acetylation

(2010) Darren Yang et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

DNA–DNA Interactions in Tight Supercoils Are Described by a Small Effective Charge Density

(2010) Christopher Maffeo et al.   PHYSICAL REVIEW LETTERS

Nucleosome Shape Dictates Chromatin Fiber Structure

(2009) Martin Depken et al.   BIOPHYSICAL JOURNAL

Hidden Markov Analysis of Nucleosome Unwrapping Under Force

(2009) M. Kruithof et al.   BIOPHYSICAL JOURNAL

The folding and unfolding of eukaryotic chromatin

(2009) Andrew Bassett et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Structural Mechanics of DNA Wrapping in the Nucleosome

(2009) Federica Battistini et al.   JOURNAL OF MOLECULAR BIOLOGY

Single-molecule force spectroscopy reveals a highly compliant helical folding for the 30-nm chromatin fiber

(2009) Maarten Kruithof et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

High-resolution dynamic mapping of histone-DNA interactions in a nucleosome

(2009) Michael A Hall et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Evidence for heteromorphic chromatin fibers from analysis of nucleosome interactions

(2009) S. A. Grigoryev et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome organization: Balancing stability and plasticity

(2008) Malte Wachsmuth et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

The Effect of Internucleosomal Interaction on Folding of the Chromatin Fiber

(2008) René Stehr et al.   BIOPHYSICAL JOURNAL

Nucleosome Geometry and Internucleosomal Interactions Control the Chromatin Fiber Conformation

(2008) Nick Kepper et al.   BIOPHYSICAL JOURNAL

Hydrodynamic Studies on Defined Heterochromatin Fragments Support a 30-nm Fiber Having Six Nucleosomes per Turn

(2008) Rodolfo Ghirlando et al.   JOURNAL OF MOLECULAR BIOLOGY

Spontaneous Access to DNA Target Sites in Folded Chromatin Fibers

(2008) Michael G. Poirier et al.   JOURNAL OF MOLECULAR BIOLOGY

30 nm Chromatin Fibre Decompaction Requires both H4-K16 Acetylation and Linker Histone Eviction

(2008) Philip J.J. Robinson et al.   JOURNAL OF MOLECULAR BIOLOGY

Brownian Dynamics Simulation of DNA Unrolling from the Nucleosome†

(2008) T. Wocjan et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Nucleosome repeat length and linker histone stoichiometry determine chromatin fiber structure

(2008) Andrew Routh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Subpiconewton Dynamic Force Spectroscopy Using Magnetic Tweezers

(2007) M. Kruithof et al.   BIOPHYSICAL JOURNAL

Nucleosome destabilization in the epigenetic regulation of gene expression

(2007) Steven Henikoff   NATURE REVIEWS GENETICS