4.7 Article

Photocurrent and Electronic Activities of Oriented-His-Tagged Photosynthetic Light-Harvesting/Reaction Center Core Complexes Assembled onto a Gold Electrode

Journal

BIOMACROMOLECULES
Volume 13, Issue 2, Pages 432-438

Publisher

AMER CHEMICAL SOC
DOI: 10.1021/bm201457s

Keywords

-

Funding

  1. Ministry of Education, Culture, Sports, Science, and Technology of Japan
  2. AOARD
  3. EPSRC
  4. Human Frontiers of Science Program
  5. Biotechnology and Biological Sciences Research Council [BB/J008230/1] Funding Source: researchfish
  6. Engineering and Physical Sciences Research Council [EP/F047851/1] Funding Source: researchfish
  7. Grants-in-Aid for Scientific Research [20111012, 22018011, 20350053] Funding Source: KAKEN
  8. BBSRC [BB/J008230/1] Funding Source: UKRI
  9. EPSRC [EP/F047851/1] Funding Source: UKRI

Ask authors/readers for more resources

A polyhistidine (His) tag was fused to the C- or N-terminus of the light harvesting (LH1)-alpha chain of the photosynthetic antenna core complex (LH1-RC) from Rhodobacter sphaeroides to allow immobilization of the complex on a solid substrate with defined orientation. His-tagged LH1-RCs were adsorbed onto a gold electrode modified with Ni-NTA. The LH1-RC with the C-terminal His-tag (C-His LH1-RC) on the modified electrode produced a photovoltaic response upon illumination. Electron transfer is unidirectional within the RC and starts when the bacteriochlorophyll a dimer in the RC is activated by light absorbed by LH1. The LH1-RC with the N-terminal His tag (N His LH1-RC) produced very little or no photocurrent upon illumination at any wavelength. The conductivity of the His tagged LH1-RC was measured with point contact current imaging atomic force microscopy, indicating that 60% of the C-His LH1-RC are correctly oriented (N-His 63%). The oriented C-His LH1-RC or N-His LH1-RC showed semiconductive behavior, that is, had the opposite, orientation. These results indicate that the His tag successfully controlled the orientation of the RC on the solid substrate, and that the RC produced photocurrent depending upon the orientation on the electrode.

Authors

I am an author on this paper
Click your name to claim this paper and add it to your profile.

Reviews

Primary Rating

4.7
Not enough ratings

Secondary Ratings

Novelty
-
Significance
-
Scientific rigor
-
Rate this paper

Recommended

Article Physics, Applied

Performance of Ag-Ag2S core-shell nanoparticle-based random network reservoir computing device

Hadiyawarman, Yuki Usami, Takumi Kotooka, Saman Azhari, Masanori Eguchi, Hirofumi Tanaka

Summary: The study developed RC devices utilizing Ag-Ag2S core-shell nanoparticles as the reservoir layer, demonstrating the importance of dynamics between the nanoparticles for high accuracy in target waveform generation. The research highlights the great potential of Ag-Ag2S NPs for the development of next-generation RC hardware.

JAPANESE JOURNAL OF APPLIED PHYSICS (2021)

Article Physics, Applied

Room temperature demonstration of in-materio reservoir computing for optimizing Boolean function with single-walled carbon nanotube/porphyrin-polyoxometalate composite

Deep Banerjee, Saman Azhari, Yuki Usami, Hirofumi Tanaka

Summary: This study proposes a method for demonstrating in-materio reservoir computing at room temperature using a SWNT/Por-POM network, successfully reconstructing various Boolean functions with high accuracy through supervised training. The echo-state property and recurrent connection of RC enabled consistent performance over multiple test datasets, with the presence of negative differential resistance dynamics aiding the construction of complex Boolean functions by incorporating additive and subtractive functions equivalently.

APPLIED PHYSICS EXPRESS (2021)

Article Multidisciplinary Sciences

Asymmetric structure of the native Rhodobacter sphaeroides dimeric LH1-RC complex

Kazutoshi Tani, Ryo Kanno, Riku Kikuchi, Saki Kawamura, Kenji V. P. Nagashima, Malgorzata Hall, Ai Takahashi, Long-Jiang Yu, Yukihiro Kimura, Michael T. Madigan, Akira Mizoguchi, Bruno M. Humbel, Zheng-Yu Wang-Otomo

Summary: In this study, the authors used cryo-EM to analyze the structure of the light-harvesting-reaction center complex in Rhodobacter sphaeroides. They found asymmetric features and altered shape in the complex, and also identified the critical role of protein-U in assembly and stability.

NATURE COMMUNICATIONS (2022)

Article Physics, Applied

Random network device fabricated using Ag2Se nanowires for data augmentation with binarized convolutional neural network

Takumi Kotooka, Yuichiro Tanaka, Hakaru Tamukoh, Yuki Usami, Hirofumi Tanaka

Summary: An Ag2Se nanowire random network was created to serve as a data augmentation device and combined with a binary convolutional neural network (BCNN) for accurate voice classification. The Ag2Se device utilized the nonlinear high-dimensional characteristics of conductive filaments at cross junctions to transform input data into higher-order multiple signals, thereby improving classification accuracy. The study suggests that material-based hardware can be used as a fundamental technology for information processing, achieving data augmentation performance comparable to software.

APPLIED PHYSICS EXPRESS (2023)

Article Physics, Applied

Ag2S island network reservoir that works with direct optical signal inputs

Yosuke Shimizu, Kazuki Minegishi, Hirofumi Tanaka, Tsuyoshi Hasegawa

Summary: Researchers have developed a physical reservoir using an Ag2S island network, which can accept direct light irradiation as input. Short-term memory and nonlinearity required for the reservoir are achieved through the diffusion of Ag+ cations in each Ag2S island and the growth of Ag filaments between Ag2S islands. It has been found that direct light irradiation to Ag2S islands can change the local conductivity, leading to improved performance in short-term memory and nonlinearity of the reservoir. By utilizing this effect, the researchers successfully performed a pattern classification of light irradiated to the Ag2S island network reservoir through a rectangular slit, achieving an accuracy of over 95%.

JAPANESE JOURNAL OF APPLIED PHYSICS (2023)

Article Biology

An LH1-RC photocomplex from an extremophilic phototroph provides insight into origins of two photosynthesis proteins

Kazutoshi Tani, Ryo Kanno, Keigo Kurosawa, Shinichi Takaichi, Kenji V. P. Nagashima, Malgorzata Hall, Long-Jiang Yu, Yukihiro Kimura, Michael T. Madigan, Akira Mizoguchi, Bruno M. Humbel, Zheng-Yu Wang-Otomo

Summary: This study presents the cryo-EM structure of the LH1-RC complex from the acidophilic anaerobic purple bacteria Rpi. globiformis and compares it with other photosynthetic bacteria. The findings provide insights into the evolution and function of photosynthetic bacteria.

COMMUNICATIONS BIOLOGY (2022)

Article Engineering, Electrical & Electronic

Integration of Wireless Power Transfer Technology With Hierarchical Multiwalled Carbon Nanotubes-Polydimethylsiloxane Piezo-Responsive Pressure Sensor for Remote Force Measurement

Saman Azhari, Kouki Kimizuka, Gabor Mehes, Yuki Usami, Yasuhiko Hayashi, Hirofumi Tanaka, Takeo Miyake

Summary: Integrating sensory devices with wireless power transfer technology allows for remote sensing with complex electronic circuitry and communication protocols. Researchers have successfully integrated piezo-responsive porous multiwalled carbon nanotubes/polydimethylsiloxane nanocomposites with a near-field wireless power transfer system to remotely monitor mechanical force. The wireless system transfers power bidirectionally and detects impedance changes in the receiver circuit to wirelessly monitor finger bending and applied force. This approach offers a new path for disposable haptic-based sensory applications in various fields.

IEEE SENSORS JOURNAL (2023)

Article Physics, Applied

Performance improvement of in-materio reservoir computing by noise injection

Masaya Hakoshima, Yuki Usami, Takumi Kotooka, Hirofumi Tanaka

Summary: The computation performance of the in-materio reservoir device was evaluated by adjusting the intensity of noise injection. The reservoir device was synthesized using a sol-gel method with an alpha-Fe2O3/titanium bismuth oxide composite. Characterization tests confirmed the presence of alpha-Fe2O3, TiO2, and Bi4Ti3O12 nanoparticles. The results showed nonlinearity, phase differences, and high harmonics in the V-t curves, and the prediction accuracy improved with the addition of a small amount of white noise voltage.

JAPANESE JOURNAL OF APPLIED PHYSICS (2023)

Article Engineering, Environmental

High field-effect mobility in oriented thin films of D-A type semiconducting polymers by engineering stable interfacial system

Shubham Sharma, Ajendra K. Vats, Linjun Tang, Feng Kaishan, Jumpei Toyoda, Shuichi Nagamatsu, Yoshito Ando, Masaaki Tamagawa, Hirofumi Tanaka, Manish Pandey, Shyam S. Pandey

Summary: Conjugated polymers (CPs) are excellent organic semiconducting materials for flexible electronic applications. Controlling molecular ordering and the formation of large aggregates is crucial in controlling the electrical properties of CP-based devices.

CHEMICAL ENGINEERING JOURNAL (2023)

Article Chemistry, Multidisciplinary

Photoinduced crystal melting with luminescence evolution based on conformational isomerisation

Mao Komura, Hikaru Sotome, Hiroshi Miyasaka, Takuji Ogawa, Yosuke Tani

Summary: The phenomenon of crystal melting by light irradiation, known as photo-induced crystal-to-liquid transition (PCLT), can dramatically change material properties with high spatiotemporal resolution. We report on heteroaromatic 1,2-diketones as a new class of PCLT-active compounds, whose PCLT is based on conformational isomerisation. The luminescence evolution observed in one of the diketones prior to crystal melting provides insights into the sequential PCLT processes.

CHEMICAL SCIENCE (2023)

Article Chemistry, Multidisciplinary

Influence of junction resistance on spatiotemporal dynamics and reservoir computing performance arising from an SWNT/POM 3D network formed via a scaffold template technique

Saman Azhari, Deep Banerjee, Takumi Kotooka, Yuki Usami, Hirofumi Tanaka

Summary: Creating a physical device that can mimic the human brain functions is a goal for scientists. A 3D porous template was used as a scaffold to fabricate a 3D network of a nanocomposite, overcoming the difficulty in controlling network density in a 2D reservoir system. The 3D device showed improved nonlinear dynamics, spatiotemporal dynamics, and performance in waveform generation compared to the 2D system, with a correlation between resistive junctions and performance.

NANOSCALE (2023)

Review Engineering, Electrical & Electronic

In-materio computing in random networks of carbon nanotubes complexed with chemically dynamic molecules: a review

H. Tanaka, S. Azhari, Y. Usami, D. Banerjee, T. Kotooka, O. Srikimkaew, T-T Dang, S. Murazoe, R. Oyabu, K. Kimizuka, M. Hakoshima

Summary: This paper reviews the progress of random networks of carbon nanotubes as highly energy-efficient computational devices. It systematically explores the applications of carbon nanotubes in neuromorphic and unconventional computing, highlighting their exceptional abilities in performing nonlinear in-materio computing and classification tasks.

NEUROMORPHIC COMPUTING AND ENGINEERING (2022)

Article Chemistry, Multidisciplinary

In-materio reservoir working at low frequencies in a Ag2S-island network

Motoharu Nakajima, Kazuki Minegishi, Yosuke Shimizu, Yuki Usami, Hirofumi Tanaka, Tsuyoshi Hasegawa

Summary: In this study, an Ag2S-island network was used as a reservoir system for unconventional computing. The growth and shrinkage of Ag filaments in each Ag2S island caused local conductance change, resulting in a unique non-linear response. By adjusting the frequency and amplitude of the input signals, the capability of the Ag2S-island network as a reservoir was evaluated, and logical operations were performed with an accuracy of over 99%.

NANOSCALE (2022)

Article Automation & Control Systems

Emergence of In-Materio Intelligence from an Incidental Structure of a Single-Walled Carbon Nanotube-Porphyrin Polyoxometalate Random Network

Deep Banerjee, Takumi Kotooka, Saman Azhari, Yuki Usami, Takuji Ogawa, James K. Gimzewski, Hakaru Tamukoh, Hirofumi Tanaka

Summary: This paper presents a hardware-based reservoir computing (RC) platform using SWNT-Por-POM complex, which demonstrates fundamental properties such as nonlinearity, higher harmonic generation, and 1/f(gamma) power law information processing. The device achieves high fitting accuracy and successful object classification based on waveform generation and tactile inputs.

ADVANCED INTELLIGENT SYSTEMS (2022)

No Data Available