Miocene divergence, phenotypically cryptic lineages, and contrasting distribution patterns in common lichen-forming fungi (Ascomycota: Parmeliaceae)

Discovery of cryptic species among North American pine-feedingChionaspisscale insects (Hemiptera: Diaspididae)

(2012) RODGER A. GWIAZDOWSKI et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages

(2012) Joseph W Brown et al.   BMC BIOLOGY

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Is Recombination a Problem for Species-Tree Analyses?

(2012) Hayley C. Lanier et al.   SYSTEMATIC BIOLOGY

The age and diversification of terrestrial New World ecosystems through Cretaceous and Cenozoic time

(2011) A. Graham   AMERICAN JOURNAL OF BOTANY

Species delimitation and evolution in morphologically and chemically diverse communities of the lichen-forming genus Xanthoparmelia (Parmeliaceae, Ascomycota) in western North America

(2011) Steven D. Leavitt et al.   AMERICAN JOURNAL OF BOTANY

Goodbye morphology? A paradigm shift in the delimitation of species in lichenized fungi

(2011) H. Thorsten Lumbsch et al.   FUNGAL DIVERSITY

Recent origin, active speciation and dispersal for the lichen genus Nephroma (Peltigerales) in Macaronesia

(2011) Emmanuël Sérusiaux et al.   JOURNAL OF BIOGEOGRAPHY

Establishment success of lichen diaspores in young and old boreal rainforests: a comparison between Lobaria pulmonaria and L. scrobiculata

(2011) Olga HILMO et al.   LICHENOLOGIST

A taxonomic study of Melanelixia fuliginosa in Europe

(2011) Ulf ARUP et al.   LICHENOLOGIST

Parmelia sulcata (Ascomycota: Parmeliaceae), a sympatric monophyletic species complex

(2011) Maria del Carmen MOLINA et al.   LICHENOLOGIST

Species delimitations in the Cladonia cariosa group (Cladoniaceae, Ascomycota)

(2011) Raquel PINO-BODAS et al.   LICHENOLOGIST

Do photobionts influence the ecology of lichens? A case study of environmental preferences in symbiotic green alga Asterochloris (Trebouxiophyceae)

(2011) ONDŘEJ PEKSA et al.   MOLECULAR ECOLOGY

Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata

(2011) F. FERNÁNDEZ-MENDOZA et al.   MOLECULAR ECOLOGY

Species delimitation in taxonomically difficult lichen-forming fungi: An example from morphologically and chemically diverse Xanthoparmelia (Parmeliaceae) in North America

(2011) Steven D. Leavitt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Complex patterns of speciation in cosmopolitan “rock posy” lichens – Discovering and delimiting cryptic fungal species in the lichen-forming Rhizoplaca melanophthalma species-complex (Lecanoraceae, Ascomycota)

(2011) Steven D. Leavitt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Parallel evolution and phenotypic divergence in lichenized fungi: A case study in the lichen-forming fungal family Graphidaceae (Ascomycota: Lecanoromycetes: Ostropales)

(2011) Eimy Rivas Plata et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Another example of cryptic diversity in lichen-forming fungi: the new species Parmelia mayi (Ascomycota: Parmeliaceae)

(2011) M. Carmen Molina et al.   ORGANISMS DIVERSITY & EVOLUTION

Origin and Diversification of Major Clades in Parmelioid Lichens (Parmeliaceae, Ascomycota) during the Paleogene Inferred by Bayesian Analysis

(2011) Guillermo Amo de Paz et al.   PLoS One

Accuracy and Precision of Species Trees: Effects of Locus, Individual, and Base Pair Sampling on Inference of Species Trees in Lizards of the Liolaemus darwinii Group (Squamata, Liolaemidae)

(2011) Arley Camargo et al.   SYSTEMATIC BIOLOGY

Cryptic species in lichen-forming fungi

(2011) Ana Crespo et al.   IMA Fungus

Phylogeography and divergence date estimates of a lichen species complex with a disjunct distribution pattern

(2010) Mónica A. G. Otálora et al.   AMERICAN JOURNAL OF BOTANY

Cryptic species and species pairs in lichens: A discussion on the relationship between molecular phylogenies and morphological characters

(2010) Ana Crespo et al.   ANALES DEL JARDIN BOTANICO DE MADRID

The genusKaroowia(Parmeliaceae, Ascomycota) includes unrelated clades nested withinXanthoparmelia

(2010) Guillermo Amo de Paz et al.   AUSTRALIAN SYSTEMATIC BOTANY

DensiTree: making sense of sets of phylogenetic trees

(2010) R. R. Bouckaert   BIOINFORMATICS

ESTIMATING DIVERSIFICATION RATES: HOW USEFUL ARE DIVERGENCE TIMES?

(2010) Joel O. Wertheim et al.   EVOLUTION

CALIBRATING DIVERGENCE TIMES ON SPECIES TREES VERSUS GENE TREES: IMPLICATIONS FOR SPECIATION HISTORY OF APHELOCOMA JAYS

(2010) John E. McCormack et al.   EVOLUTION

Molecular phylogenetic studies reveal an undescribed species within the North American concept of Melanelixia glabra (Parmeliaceae)

(2010) Pradeep K. Divakar et al.   FUNGAL DIVERSITY

Genetic distances within and among species in monophyletic lineages of Parmeliaceae (Ascomycota) as a tool for taxon delimitation

(2010) Ruth Del-Prado et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Joint Dispersal Does Not Imply Maintenance of Partnerships in Lichen Symbioses

(2009) Sabine Wornik et al.   MICROBIAL ECOLOGY

Bayesian Inference of Species Trees from Multilocus Data

(2009) J. Heled et al.   MOLECULAR BIOLOGY AND EVOLUTION

New primers for promising single-copy genes in fungal phylogenetics and systematics

(2009) I. Schmitt et al.   PERSOONIA

Species Tree Discordance Traces to Phylogeographic Clade Boundaries in North American Fence Lizards (Sceloporus)

(2009) Adam D. Leaché   SYSTEMATIC BIOLOGY

Accelerated Species Inventory on Madagascar Using Coalescent-Based Models of Species Delineation

(2009) Michael T. Monaghan et al.   SYSTEMATIC BIOLOGY

Estimating Species Trees: Methods of Phylogenetic Analysis When There Is Incongruence across Genes

(2009) L. Lacey Knowles   SYSTEMATIC BIOLOGY

Gene tree discordance, phylogenetic inference and the multispecies coalescent

(2009) James H. Degnan et al.   TRENDS IN ECOLOGY & EVOLUTION

Recent developments in the MAFFT multiple sequence alignment program

(2008) K. Katoh et al.   BRIEFINGS IN BIOINFORMATICS

IS A NEW AND GENERAL THEORY OF MOLECULAR SYSTEMATICS EMERGING?

(2008) Scott V. Edwards   EVOLUTION

Molecular data show that Topeliopsis (Ascomycota, Thelotremataceae) is polyphyletic

(2008) Armin MANGOLD et al.   LICHENOLOGIST

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

An early Cenozoic perspective on greenhouse warming and carbon-cycle dynamics

(2008) James C. Zachos et al.   NATURE

Multilocus Phylogenetics of a Rapid Radiation in the Genus Thomomys (Rodentia: Geomyidae)

(2008) Natalia M. Belfiore et al.   SYSTEMATIC BIOLOGY

A Rapid Bootstrap Algorithm for the RAxML Web Servers

(2008) Alexandros Stamatakis et al.   SYSTEMATIC BIOLOGY

Phylogeography across a continent: The evolutionary and demographic history of the North American racer (Serpentes: Colubridae: Coluber constrictor)

(2007) Frank T. Burbrink et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The delimitation of Antarctic and bipolar species of neuropogonoid Usnea (Ascomycota, Lecanorales): a cohesion approach of species recognition for the Usnea perpusilla complex

(2007) Nora Wirtz et al.