Mirin: identifying microRNA regulatory modules in protein–protein interaction networks

Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks

(2013) B. Chen et al.   BRIEFINGS IN BIOINFORMATICS

MicroRNA-Regulated Protein-Protein Interaction Networks and Their Functions in Breast Cancer

(2013) Chia-Hsien Lee et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Downregulation of Steroid Receptor Coactivator-2 Modulates Estrogen-Responsive Genes and Stimulates Proliferation of MCF-7 Breast Cancer Cells

(2013) Ingvild S. Fenne et al.   PLoS One

Crosstalk between transcription factors and microRNAs in human protein interaction network

(2012) Chen-Ching Lin et al.   BMC Systems Biology

Integrative network analysis reveals active microRNAs and their functions in gastric cancer

(2011) Chien-Wei Tseng et al.   BMC Systems Biology

mirConnX: condition-specific mRNA-microRNA network integrator

(2011) G. T. Huang et al.   NUCLEIC ACIDS RESEARCH

GOBO: Gene Expression-Based Outcome for Breast Cancer Online

(2011) Markus Ringnér et al.   PLoS One

Cytoscape Web: an interactive web-based network browser

(2010) Christian T. Lopes et al.   BIOINFORMATICS

Dynamic functional modules in co-expressed protein interaction networks of dilated cardiomyopathy

(2010) Chen-Ching Lin et al.   BMC Systems Biology

miR2Disease: a manually curated database for microRNA deregulation in human disease

(2008) Q. Jiang et al.   NUCLEIC ACIDS RESEARCH

Characterization of microRNA-regulated protein-protein interaction network

(2008) Chun-Wei Hsu et al.   PROTEOMICS