Extracting 3D cell parameters from dense tissue environments: application to the development of the mouse heart

Quantitative analysis of polarity in 3D reveals local cell coordination in the embryonic mouse heart

(2012) J.-F. Le Garrec et al.   DEVELOPMENT

Icy: an open bioimage informatics platform for extended reproducible research

(2012) Fabrice de Chaumont et al.   NATURE METHODS

The Centrosome in Cells and Organisms

(2012) M. Bornens   SCIENCE

Mechanical Control of Morphogenesis by Fat/Dachsous/Four-Jointed Planar Cell Polarity Pathway

(2012) F. Bosveld et al.   SCIENCE

ACME: Automated Cell Morphology Extractor for Comprehensive Reconstruction of Cell Membranes

(2012) Kishore R. Mosaliganti et al.   PLoS Computational Biology

Two ways to use imaging: focusing directly on mechanism, or indirectly via behaviour?

(2011) James Sharpe   CURRENT OPINION IN GENETICS & DEVELOPMENT

3-D Active Meshes: Fast Discrete Deformable Models for Cell Tracking in 3-D Time-Lapse Microscopy

(2011) A Dufour et al.   IEEE TRANSACTIONS ON IMAGE PROCESSING

Lighting up developmental mechanisms: how fluorescence imaging heralded a new era

(2010) M. Mavrakis et al.   DEVELOPMENT

3D early embryogenesis image filtering by nonlinear partial differential equations

(2010) Z. Krivá et al.   MEDICAL IMAGE ANALYSIS

Software for bead-based registration of selective plane illumination microscopy data

(2010) Stephan Preibisch et al.   NATURE METHODS

Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution

(2010) Romain Fernandez et al.   NATURE METHODS

Dynamic Analysis of Vascular Morphogenesis Using Transgenic Quail Embryos

(2010) Yuki Sato et al.   PLoS One

The Role of Spatially Controlled Cell Proliferation in Limb Bud Morphogenesis

(2010) Bernd Boehm et al.   PLOS BIOLOGY

Cells Segmentation From 3-D Confocal Images of Early Zebrafish Embryogenesis

(2009) C. Zanella et al.   IEEE TRANSACTIONS ON IMAGE PROCESSING

Sfrp Controls Apicobasal Polarity and Oriented Cell Division in Developing Gut Epithelium

(2009) Makoto Matsuyama et al.   PLoS Genetics

Localizing Region-Based Active Contours

(2008) S. Lankton et al.   IEEE TRANSACTIONS ON IMAGE PROCESSING

Loss of Fat4 disrupts PCP signaling and oriented cell division and leads to cystic kidney disease

(2008) Sakura Saburi et al.   NATURE GENETICS