Integrating sequence, expression and interaction data to determine condition-specific miRNA regulation

Comprehensive survey of human brain microRNA by deep sequencing

(2012) Ning-Yi Shao et al.   BMC GENOMICS

miRNAs versus oncogenes: the power of social networking

(2012) Marcos Malumbres   Molecular Systems Biology

A Catalogue of Glioblastoma and Brain MicroRNAs Identified by Deep Sequencing

(2012) Dasong Hua et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Uncovering MicroRNA and Transcription Factor Mediated Regulatory Networks in Glioblastoma

(2012) Jingchun Sun et al.   PLoS Computational Biology

A novel computational framework for simultaneous integration of multiple types of genomic data to identify microRNA-gene regulatory modules

(2011) Shihua Zhang et al.   BIOINFORMATICS

MicroRNAs coordinately regulate protein complexes

(2011) Steffen Sass et al.   BMC Systems Biology

Let-7 and miR-200 microRNAs: Guardians against pluripotency and cancer progression

(2011) Marcus E. Peter   CELL CYCLE

mirConnX: condition-specific mRNA-microRNA network integrator

(2011) G. T. Huang et al.   NUCLEIC ACIDS RESEARCH

A Densely Interconnected Genome-Wide Network of MicroRNAs and Oncogenic Pathways Revealed Using Gene Expression Signatures

(2011) Chia Huey Ooi et al.   PLoS Genetics

MicroRNA miR-302 Inhibits the Tumorigenecity of Human Pluripotent Stem Cells by Coordinate Suppression of the CDK2 and CDK4/6 Cell Cycle Pathways

(2010) S.-L. Lin et al.   CANCER RESEARCH

Let-7 microRNA inhibits the proliferation of human glioblastoma cells

(2010) Soon-Tae Lee et al.   JOURNAL OF NEURO-ONCOLOGY

Small molecules with big effects: The role of the microRNAome in cancer and carcinogenesis

(2010) Igor Koturbash et al.   MUTATION RESEARCH-GENETIC TOXICOLOGY AND ENVIRONMENTAL MUTAGENESIS

The BioGRID Interaction Database: 2011 update

(2010) C. Stark et al.   NUCLEIC ACIDS RESEARCH

De-repression of CTGF via the miR-17-92 cluster upon differentiation of human glioblastoma spheroid cultures

(2010) A Ernst et al.   ONCOGENE

miR-200bc/429 cluster targets PLCγ1 and differentially regulates proliferation and EGF-driven invasion than miR-200a/141 in breast cancer

(2010) S Uhlmann et al.   ONCOGENE

Aberrant overexpression and function of the miR-17-92 cluster in MLL-rearranged acute leukemia

(2010) Shuangli Mi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites

(2010) Doron Betel et al.   GENOME BIOLOGY

Next Generation Sequencing of miRNAs – Strategies, Resources and Methods

(2010) Susanne Motameny et al.   Genes

Next generation software for functional trend analysis

(2009) G. F. Berriz et al.   BIOINFORMATICS

MicroRNA-34a Inhibits Glioblastoma Growth by Targeting Multiple Oncogenes

(2009) Y. Li et al.   CANCER RESEARCH

MicroRNAs: Target Recognition and Regulatory Functions

(2009) David P. Bartel   CELL

MicroRNA and leukemia: Tiny molecule, great function

(2009) Haifeng Zhao et al.   CRITICAL REVIEWS IN ONCOLOGY HEMATOLOGY

Coordinate Regulation of FOXO1 by miR-27a, miR-96, and miR-182 in Breast Cancer Cells

(2009) Irene K. Guttilla et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

MicroRNA involvement in the pathogenesis and management of breast cancer

(2009) S M Khoshnaw et al.   JOURNAL OF CLINICAL PATHOLOGY

A Combined Expression-Interaction Model for Inferring the Temporal Activity of Transcription Factors

(2009) Yanxin Shi et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Increasing MicroRNA target prediction confidence by the relative R2 method

(2009) Hsiuying Wang et al.   JOURNAL OF THEORETICAL BIOLOGY

Joint covariate selection and joint subspace selection for multiple classification problems

(2009) Guillaume Obozinski et al.   STATISTICS AND COMPUTING

MicroRNA expression profiling in relation to the genetic heterogeneity of acute myeloid leukemia

(2008) M. Jongen-Lavrencic et al.   BLOOD

miR-34a as part of the resistance network in chronic lymphocytic leukemia

(2008) T. Zenz et al.   BLOOD

miRiad Roles for the miR-17-92 Cluster in Development and Disease

(2008) Joshua T. Mendell   CELL

The miR-200 Family Inhibits Epithelial-Mesenchymal Transition and Cancer Cell Migration by Direct Targeting of E-cadherin Transcriptional RepressorsZEB1andZEB2

(2008) Manav Korpal et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Inferring MicroRNA Activities by Combining Gene Expression with MicroRNA Target Prediction

(2008) Chao Cheng et al.   PLoS One

MiR-15a and miR-16-1 cluster functions in human leukemia

(2008) George A. Calin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of microRNA-regulated protein-protein interaction network

(2008) Chun-Wei Hsu et al.   PROTEOMICS