NetworkTrail--a web service for identifying and visualizing deregulated subnetworks

Optimally discriminative subnetwork markers predict response to chemotherapy

(2011) P. Dao et al.   BIOINFORMATICS

Algorithms for Detecting Significantly Mutated Pathways in Cancer

(2011) Fabio Vandin et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Cytoscape Web: an interactive web-based network browser

(2010) Christian T. Lopes et al.   BIOINFORMATICS

jORCA: easily integrating bioinformatics Web Services

(2010) Victoria Martín-Requena et al.   BIOINFORMATICS

A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis

(2009) Andreas Keller et al.   BIOINFORMATICS

KEGG for representation and analysis of molecular networks involving diseases and drugs

(2009) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Identifying functional modules in protein-protein interaction networks: an integrated exact approach

(2008) M. T. Dittrich et al.   BIOINFORMATICS