DMEAS: DNA methylation entropy analysis software

Heterogeneity and Randomness of DNA Methylation Patterns in Human Embryonic Stem Cells

(2012) Albert G. Tsai et al.   DNA AND CELL BIOLOGY

CpG_MPs: identification of CpG methylation patterns of genomic regions from high-throughput bisulfite sequencing data

(2012) Jianzhong Su et al.   NUCLEIC ACIDS RESEARCH

Heterogeneity and Tumor History

(2012) D. Shibata   SCIENCE

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

(2011) Felix Krueger et al.   BIOINFORMATICS

QDMR: a quantitative method for identification of differentially methylated regions by entropy

(2011) Yan Zhang et al.   NUCLEIC ACIDS RESEARCH

BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing

(2011) Pavlo Lutsik et al.   NUCLEIC ACIDS RESEARCH

Genome-wide quantitative assessment of variation in DNA methylation patterns

(2011) Hehuang Xie et al.   NUCLEIC ACIDS RESEARCH

BISMA - Fast and accurate bisulfite sequencing data analysis of individual clones from unique and repetitive sequences

(2010) Christian Rohde et al.   BMC BIOINFORMATICS