ECOH: An Enzyme Commission number predictor using mutual information and a support vector machine

Is EC class predictable from reaction mechanism?

(2012) Neetika Nath et al.   BMC BIOINFORMATICS

EnzML: multi-label prediction of enzyme classes using InterPro signatures

(2012) Luna De Ferrari et al.   BMC BIOINFORMATICS

LIBSVM

(2012) Chih-Chung Chang et al.   ACM Transactions on Intelligent Systems and Technology

Toward mechanistic classification of enzyme functions

(2011) Daniel E Almonacid et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

MAPLSC: A novel multi-class classifier for medical diagnosis

(2011) Mingyu You et al.   International Journal of Data Mining and Bioinformatics

MACiE: exploring the diversity of biochemical reactions

(2011) Gemma L. Holliday et al.   NUCLEIC ACIDS RESEARCH

KEGG for integration and interpretation of large-scale molecular data sets

(2011) M. Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Reaction graph kernels predict EC numbers of unknown enzymatic reactions in plant secondary metabolism

(2010) Hiroto Saigo et al.   BMC BIOINFORMATICS

Similarity Perception of Reactions Catalyzed by Oxidoreductases and Hydrolases Using Different Classification Methods

(2010) Xiaoying Hu et al.   Journal of Chemical Information and Modeling

Extending CATH: increasing coverage of the protein structure universe and linking structure with function

(2010) A. L. Cuff et al.   NUCLEIC ACIDS RESEARCH

Automatic Assignment of EC Numbers

(2010) Volker Egelhofer et al.   PLoS Computational Biology

Automatic assignment of reaction operators to enzymatic reactions

(2009) M. Leber et al.   BIOINFORMATICS

E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs

(2009) Y. Yamanishi et al.   BIOINFORMATICS

Learning from Imbalanced Data

(2009) Haibo He et al.   IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING

Investigations of Enzyme-Catalyzed Reactions Based on Physicochemical Descriptors Applied to Hydrolases

(2009) Oliver Sacher et al.   Journal of Chemical Information and Modeling

Assignment of EC Numbers to Enzymatic Reactions with MOLMAP Reaction Descriptors and Random Forests

(2009) Diogo A. R. S. Latino et al.   Journal of Chemical Information and Modeling

A maximum common substructure-based algorithm for searching and predicting drug-like compounds

(2008) Yiqun Cao et al.   BIOINFORMATICS

Sequence and Structural Features of Enzymes and their Active Sites by EC Class

(2008) Tracey Bray et al.   JOURNAL OF MOLECULAR BIOLOGY

Genome-wide enzyme annotation with precision control: Catalytic families (CatFam) databases

(2008) Chenggang Yu et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS