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Title
Long read alignment based on maximal exact match seeds
Authors
Keywords
-
Journal
BIOINFORMATICS
Volume 28, Issue 18, Pages i318-i324
Publisher
Oxford University Press (OUP)
Online
2012-09-08
DOI
10.1093/bioinformatics/bts414
References
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Related references
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- GASSST: global alignment short sequence search tool
- (2010) Guillaume Rizk et al. BIOINFORMATICS
- Fast and accurate long-read alignment with Burrows–Wheeler transform
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- The Sequence Alignment/Map format and SAMtools
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- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- BFAST: An Alignment Tool for Large Scale Genome Resequencing
- (2009) Nils Homer et al. PLoS One
- SHRiMP: Accurate Mapping of Short Color-space Reads
- (2009) Stephen M. Rumble et al. PLoS Computational Biology
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Compressed indexing and local alignment of DNA
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- SOAP: short oligonucleotide alignment program
- (2008) R. Li et al. BIOINFORMATICS
- Mapping short DNA sequencing reads and calling variants using mapping quality scores
- (2008) H. Li et al. GENOME RESEARCH
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