Blockwise HMM computation for large-scale population genomic inference

Importance sampling and the two-locus model with subdivided population structure

(2016) Robert C. Griffiths et al.   ADVANCES IN APPLIED PROBABILITY

Inference of Population Structure using Dense Haplotype Data

(2012) Daniel John Lawson et al.   PLoS Genetics

An Accurate Sequentially Markov Conditional Sampling Distribution for the Coalescent With Recombination

(2011) J. S. Paul et al.   GENETICS

Inference of human population history from individual whole-genome sequences

(2011) Heng Li et al.   NATURE

Recombination rates in admixed individuals identified by ancestry-based inference

(2011) Daniel Wegmann et al.   NATURE GENETICS

A linear complexity phasing method for thousands of genomes

(2011) Olivier Delaneau et al.   NATURE METHODS

MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes

(2010) Yun Li et al.   GENETIC EPIDEMIOLOGY

A Principled Approach to Deriving Approximate Conditional Sampling Distributions in Population Genetics Models with Recombination

(2010) Joshua S. Paul et al.   GENETICS

Joint estimation of gene conversion rates and mean conversion tract lengths from population SNP data

(2009) J. Yin et al.   BIOINFORMATICS

Ancestral Population Genomics: The Coalescent Hidden Markov Model Approach

(2009) J. Y. Dutheil et al.   GENETICS

An approximate likelihood for genetic data under a model with recombination and population splitting

(2009) D. Davison et al.   THEORETICAL POPULATION BIOLOGY

Sensitive Detection of Chromosomal Segments of Distinct Ancestry in Admixed Populations

(2009) Alkes L. Price et al.   PLoS Genetics

A Flexible and Accurate Genotype Imputation Method for the Next Generation of Genome-Wide Association Studies

(2009) Bryan N. Howie et al.   PLoS Genetics

Effect of genetic divergence in identifying ancestral origin using HAPAA

(2008) A. Sundquist et al.   GENOME RESEARCH

Inferring Human Colonization History Using a Copying Model

(2008) Garrett Hellenthal et al.   PLoS Genetics