TMBB-DB: a transmembrane  -barrel proteome database

BOCTOPUS: improved topology prediction of transmembrane β barrel proteins

(2012) Sikander Hayat et al.   BIOINFORMATICS

TMBHMM: A frequency profile based HMM for predicting the topology of transmembrane beta barrel proteins and the exposure status of transmembrane residues

(2011) Nitesh Kumar Singh et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Improving the detection of transmembrane  -barrel chains with N-to-1 extreme learning machines

(2011) C. Savojardo et al.   BIOINFORMATICS

Eukaryote-wide sequence analysis of mitochondrial β-barrel outer membrane proteins

(2011) Kenichiro Imai et al.   BMC GENOMICS

Statistical analysis and exposure status classification of transmembrane beta barrel residues

(2011) Sikander Hayat et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

The prediction and characterization of YshA, an unknown outer-membrane protein from Salmonella typhimurium

(2010) Thomas C. Freeman et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES

A highly accurate statistical approach for the prediction of transmembrane β-barrels

(2010) Thomas C. Freeman et al.   BIOINFORMATICS

OMPdb: a database of  -barrel outer membrane proteins from Gram-negative bacteria

(2010) K. D. Tsirigos et al.   NUCLEIC ACIDS RESEARCH

PREDICTION OF THE EXPOSURE STATUS OF TRANSMEMBRANE BETA BARREL RESIDUES FROM PROTEIN SEQUENCE

(2010) SIKANDER HAYAT et al.   Journal of Bioinformatics and Computational Biology

Prediction of membrane spanning segments and topology in β-barrel membrane proteins at better accuracy

(2009) Yu-yen Ou et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

HHomp—prediction and classification of outer membrane proteins

(2009) Michael Remmert et al.   NUCLEIC ACIDS RESEARCH

TMBETADISC-RBF: Discrimination of -barrel membrane proteins using RBF networks and PSSM profiles

(2008) Yu-Yen Ou et al.   COMPUTATIONAL BIOLOGY AND CHEMISTRY

Toward genomic identification of β-barrel membrane proteins: Composition and architecture of known structures

(2002) William C. Wimley   PROTEIN SCIENCE