Stitching gene fragments with a network matching algorithm improves gene assembly for metagenomics
Published 2012 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Stitching gene fragments with a network matching algorithm improves gene assembly for metagenomics
Authors
Keywords
-
Journal
BIOINFORMATICS
Volume 28, Issue 18, Pages i363-i369
Publisher
Oxford University Press (OUP)
Online
2012-09-08
DOI
10.1093/bioinformatics/bts388
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- How to apply de Bruijn graphs to genome assembly
- (2011) Phillip E C Compeau et al. NATURE BIOTECHNOLOGY
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- Taxonomic classification of metagenomic shotgun sequences with CARMA3
- (2011) Wolfgang Gerlach et al. NUCLEIC ACIDS RESEARCH
- Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen
- (2011) M. Hess et al. SCIENCE
- Fast and accurate long-read alignment with Burrows–Wheeler transform
- (2010) Heng Li et al. BIOINFORMATICS
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- FragGeneScan: predicting genes in short and error-prone reads
- (2010) Mina Rho et al. NUCLEIC ACIDS RESEARCH
- Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
- (2010) Jenna L. Morgan et al. PLoS One
- The effect of sequencing errors on metagenomic gene prediction
- (2009) Katharina J Hoff BMC GENOMICS
- Genome assembly reborn: recent computational challenges
- (2009) M. Pop BRIEFINGS IN BIOINFORMATICS
- De novo assembly of human genomes with massively parallel short read sequencing
- (2009) R. Li et al. GENOME RESEARCH
- The NIH Human Microbiome Project
- (2009) et al. GENOME RESEARCH
- AN ORFOME ASSEMBLY APPROACH TO METAGENOMICS SEQUENCES ANALYSIS
- (2009) YUZHEN YE et al. Journal of Bioinformatics and Computational Biology
- Metagenomics: Read Length Matters
- (2008) K. E. Wommack et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
- (2008) Micah Hamady et al. NATURE METHODS
- MetaSim—A Sequencing Simulator for Genomics and Metagenomics
- (2008) Daniel C. Richter et al. PLoS One
- Gene-Boosted Assembly of a Novel Bacterial Genome from Very Short Reads
- (2008) Steven L. Salzberg et al. PLoS Computational Biology
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now