AraPath: a knowledgebase for pathway analysis in Arabidopsis

Identification of metagenes and their Interactions through Large-scale Analysis of Arabidopsis Gene Expression Data

(2012) Tyler J Wilson et al.   BMC GENOMICS

Transcriptome analysis by GeneTrail revealed regulation of functional categories in response to alterations of iron homeostasis in Arabidopsis thaliana

(2011) Mara Schuler et al.   BMC PLANT BIOLOGY

Large-scale analysis of expression signatures reveals hidden links among diverse cellular processes

(2011) Steven X Ge   BMC Systems Biology

AGRIS: the Arabidopsis Gene Regulatory Information Server, an update

(2010) A. Yilmaz et al.   NUCLEIC ACIDS RESEARCH

AtCAST, a Tool for Exploring Gene Expression Similarities among DNA Microarray Experiments Using Networks

(2010) Eriko Sasaki et al.   PLANT AND CELL PHYSIOLOGY

Large-scale analysis of Arabidopsis transcription reveals a basal co-regulation network

(2009) Osnat Atias et al.   BMC Systems Biology

HORMONOMETER: A Tool for Discerning Transcript Signatures of Hormone Action in the Arabidopsis Transcriptome

(2009) D. Volodarsky et al.   PLANT PHYSIOLOGY