Novel search method for the discovery of functional relationships

IntelliGO: a new vector-based semantic similarity measure including annotation origin

(2011) Sidahmed Benabderrahmane et al.   BMC BIOINFORMATICS

Interactome Networks and Human Disease

(2011) Marc Vidal et al.   CELL

Improving disease gene prioritization using the semantic similarity of Gene Ontology terms

(2010) Andreas Schlicker et al.   BIOINFORMATICS

Revealing and avoiding bias in semantic similarity scores for protein pairs

(2010) Jing Wang et al.   BMC BIOINFORMATICS

It's the machine that matters: Predicting gene function and phenotype from protein networks

(2010) Peggy I. Wang et al.   Journal of Proteomics

genenames.org: the HGNC resources in 2011

(2010) R. L. Seal et al.   NUCLEIC ACIDS RESEARCH

The Mouse Genome Database (MGD): premier model organism resource for mammalian genomics and genetics

(2010) J. A. Blake et al.   NUCLEIC ACIDS RESEARCH

The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function

(2010) David Warde-Farley et al.   NUCLEIC ACIDS RESEARCH

Exploring the human genome with functional maps

(2009) C. Huttenhower et al.   GENOME RESEARCH

The Universal Protein Resource (UniProt) in 2010

(2009)   NUCLEIC ACIDS RESEARCH

Recent advances and method development for drug target identification

(2009) Janet N.Y. Chan et al.   TRENDS IN PHARMACOLOGICAL SCIENCES

Semantic Similarity in Biomedical Ontologies

(2009) Catia Pesquita et al.   PLoS Computational Biology

Annotation Error in Public Databases: Misannotation of Molecular Function in Enzyme Superfamilies

(2009) Alexandra M. Schnoes et al.   PLoS Computational Biology

The Protein Feature Ontology: a tool for the unification of protein feature annotations

(2008) G. A. Reeves et al.   BIOINFORMATICS

Defining functional distances over Gene Ontology

(2008) Angela del Pozo et al.   BMC BIOINFORMATICS

Gene Ontology term overlap as a measure of gene functional similarity

(2008) Meeta Mistry et al.   BMC BIOINFORMATICS

Metrics for GO based protein semantic similarity: a systematic evaluation

(2008) Catia Pesquita et al.   BMC BIOINFORMATICS

ICA69 is a novel Rab2 effector regulating ER–Golgi trafficking in insulinoma cells

(2008) Laura Buffa et al.   EUROPEAN JOURNAL OF CELL BIOLOGY

Use and misuse of the gene ontology annotations

(2008) Seung Yon Rhee et al.   NATURE REVIEWS GENETICS

McKusick's Online Mendelian Inheritance in Man (OMIM(R))

(2008) J. Amberger et al.   NUCLEIC ACIDS RESEARCH

Human Protein Reference Database--2009 update

(2008) T. S. Keshava Prasad et al.   NUCLEIC ACIDS RESEARCH

Reactome knowledgebase of human biological pathways and processes

(2008) L. Matthews et al.   NUCLEIC ACIDS RESEARCH

STRING 8--a global view on proteins and their functional interactions in 630 organisms

(2008) L. J. Jensen et al.   NUCLEIC ACIDS RESEARCH

InterPro: the integrative protein signature database

(2008) S. Hunter et al.   NUCLEIC ACIDS RESEARCH