A procedure to statistically evaluate agreement of differential expression for cross-species genomics

Integrated analysis of pharmacologic, clinical and SNP microarray data using Projection Onto the Most Interesting Statistical Evidence with Adaptive Permutation Testing

(2011) Stan Pounds et al.   International Journal of Data Mining and Bioinformatics

Large scale comparison of global gene expression patterns in human and mouse

(2011) Xiangqun Zheng-Bradley et al.   GENOME BIOLOGY

Subtypes of medulloblastoma have distinct developmental origins

(2010) Paul Gibson et al.   NATURE

Cross-species genomics matches driver mutations and cell compartments to model ependymoma

(2010) Robert A. Johnson et al.   NATURE

PROMISE: a tool to identify genomic features with a specific biologically interesting pattern of associations with multiple endpoint variables

(2009) Stan Pounds et al.   BIOINFORMATICS

Reference alignment of SNP microarray signals for copy number analysis of tumors

(2008) Stan Pounds et al.   BIOINFORMATICS

Statistical analysis of data from retroviral clonal experiments in the developing retina

(2007) Stan Pounds et al.   BRAIN RESEARCH