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Title
Predicting residue–residue contacts using random forest models
Authors
Keywords
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Journal
BIOINFORMATICS
Volume 27, Issue 24, Pages 3379-3384
Publisher
Oxford University Press (OUP)
Online
2011-10-21
DOI
10.1093/bioinformatics/btr579
References
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Related references
Note: Only part of the references are listed.- Improving Protein Structure Prediction Using Multiple Sequence-Based Contact Predictions
- (2011) Sitao Wu et al. STRUCTURE
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- Using multi-data hidden Markov models trained on local neighborhoods of protein structure to predict residue–residue contacts
- (2009) Patrik Björkholm et al. BIOINFORMATICS
- Prediction of DNA-binding residues from protein sequence information using random forests
- (2009) Liangjiang Wang et al. BMC GENOMICS
- NNcon: improved protein contact map prediction using 2D-recursive neural networks
- (2009) A. N. Tegge et al. NUCLEIC ACIDS RESEARCH
- Assessment of domain boundary predictions and the prediction of intramolecular contacts in CASP8
- (2009) Iakes Ezkurdia et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- REMO: A new protocol to refine full atomic protein models from C-alpha traces by optimizing hydrogen-bonding networks
- (2009) Yunqi Li et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- I-TASSER: Fully automated protein structure prediction in CASP8
- (2009) Yang Zhang PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- Prediction of Protein–Protein Interaction Sites in Sequences and 3D Structures by Random Forests
- (2009) Mile Šikić et al. PLoS Computational Biology
- A comprehensive assessment of sequence-based and template-based methods for protein contact prediction
- (2008) Sitao Wu et al. BIOINFORMATICS
- Predicting residue-residue contact maps by a two-layer, integrated neural-network method
- (2008) Bin Xue et al. PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
- SELECTpro: effective protein model selection using a structure-based energy function resistant to BLUNDERs
- (2008) Arlo Randall et al. BMC STRUCTURAL BIOLOGY
- FEATURE SELECTION IN VALIDATING MASS SPECTROMETRY DATABASE SEARCH RESULTS
- (2008) JIANWEN FANG et al. Journal of Bioinformatics and Computational Biology
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