Feature-based 3D motif filtering for ribosomal RNA

Computational approaches to 3D modeling of RNA

(2010) Christian Laing et al.   JOURNAL OF PHYSICS-CONDENSED MATTER

Arrangement of 3D structural motifs in ribosomal RNA

(2010) Karen Sargsyan et al.   NUCLEIC ACIDS RESEARCH

RNAMotifScan: automatic identification of RNA structural motifs using secondary structural alignment

(2010) Cuncong Zhong et al.   NUCLEIC ACIDS RESEARCH

RNA regulation of epigenetic processes

(2009) John S. Mattick et al.   BIOESSAYS

An Ariadne's thread to the identification and annotation of noncoding RNAs in eukaryotes

(2009) G. Solda et al.   BRIEFINGS IN BIOINFORMATICS

Genome-Wide Identification of Long Noncoding RNAs in CD8+ T Cells

(2009) K. C. Pang et al.   JOURNAL OF IMMUNOLOGY

Long non-coding RNAs: insights into functions

(2009) Tim R. Mercer et al.   NATURE REVIEWS GENETICS

Finding 3D motifs in ribosomal RNA structures

(2009) A. Apostolico et al.   NUCLEIC ACIDS RESEARCH

Coarse-grained modeling of large RNA molecules with knowledge-based potentials and structural filters

(2009) M. A. Jonikas et al.   RNA

Noncoding RNA in development

(2008) Paulo P. Amaral et al.   MAMMALIAN GENOME

The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data

(2008) Marc Parisien et al.   NATURE

Computational prediction of RNA structural motifs involved in posttranscriptional regulatory processes

(2008) M. Rabani et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Automated motif extraction and classification in RNA tertiary structures

(2008) M. Djelloul et al.   RNA

Annotation of tertiary interactions in RNA structures reveals variations and correlations

(2008) Y. Xin et al.   RNA