Exploring metabolic pathways in genome-scale networks via generating flux modes

Computing the shortest elementary flux modes in genome-scale metabolic networks

(2009) Luis F. de Figueiredo et al.   BIOINFORMATICS

Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns

(2009) C. Kaleta et al.   GENOME RESEARCH

Elementary mode analysis: a useful metabolic pathway analysis tool for characterizing cellular metabolism

(2008) Cong T. Trinh et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Large-scale computation of elementary flux modes with bit pattern trees

(2008) Marco Terzer et al.   BIOINFORMATICS

A new constraint-based description of the steady-state flux cone of metabolic networks

(2008) Abdelhalim Larhlimi et al.   DISCRETE APPLIED MATHEMATICS

Sleeping beauty mutase (sbm) is expressed and interacts with ygfd in Escherichia coli

(2008) D.S. Froese et al.   MICROBIOLOGICAL RESEARCH

Reconstruction of biochemical networks in microorganisms

(2008) Adam M. Feist et al.   NATURE REVIEWS MICROBIOLOGY