Integrated metagenomic and metaproteomic analyses of marine biofilm communities

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(2016)   ENVIRONMENTAL MICROBIOLOGY

Antifouling Coatings Influence both Abundance and Community Structure of Colonizing Biofilms: a Case Study in the Northwestern Mediterranean Sea

(2014) Mercedes Camps et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The effect of surface colour on the formation of marine micro and macrofouling communities

(2013) Sergey Dobretsov et al.   BIOFOULING

Early marine bacterial biofilm on a copper-based antifouling paint

(2013) Chia-Lung Chen et al.   INTERNATIONAL BIODETERIORATION & BIODEGRADATION

Which metaproteome? The impact of protein extraction bias on metaproteomic analyses

(2013) Dagmar Hajkova Leary et al.   MOLECULAR AND CELLULAR PROBES

Method Development for Metaproteomic Analyses of Marine Biofilms

(2012) Dagmar Hajkova Leary et al.   ANALYTICAL CHEMISTRY

Comparative Analysis of Eukaryotic Marine Microbial Assemblages from 18S rRNA Gene and Gene Transcript Clone Libraries by Using Different Methods of Extraction

(2012) Amy Koid et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Relationship between Abundance and Specific Activity of Bacterioplankton in Open Ocean Surface Waters

(2012) Dana E. Hunt et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pioneer marine biofilms on artificial surfaces including antifouling coatings immersed in two contrasting French Mediterranean coast sites

(2012) Jean-François Briand et al.   BIOFOULING

Fouling Release Coatings: A Nontoxic Alternative to Biocidal Antifouling Coatings

(2012) Marlène Lejars et al.   CHEMICAL REVIEWS

Challenges for Biological Interpretation of Environmental Proteomics Data in Non-model Organisms

(2012) W. Wesley Dowd   INTEGRATIVE AND COMPARATIVE BIOLOGY

A metagenomic assessment of winter and summer bacterioplankton from Antarctica Peninsula coastal surface waters

(2012) Joseph J Grzymski et al.   ISME Journal

A metaproteomic assessment of winter and summer bacterioplankton from Antarctic Peninsula coastal surface waters

(2012) Timothy J Williams et al.   ISME Journal

Are we missing half of the viruses in the ocean?

(2012) Grieg F Steward et al.   ISME Journal

Unipept: Tryptic Peptide-Based Biodiversity Analysis of Metaproteome Samples

(2012) Bart Mesuere et al.   JOURNAL OF PROTEOME RESEARCH

Evaluation of Methods for the Extraction and Purification of DNA from the Human Microbiome

(2012) Sanqing Yuan et al.   PLoS One

Diatom community structure on commercially available ship hull coatings

(2011) Kelli A. Zargiel et al.   BIOFOULING

Characterization of the rumen microbiota of pre-ruminant calves using metagenomic tools

(2011) Robert W. Li et al.   ENVIRONMENTAL MICROBIOLOGY

Economic impact of biofouling on a naval surface ship

(2010) M. P. Schultz et al.   BIOFOULING

SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data

(2010) Murray P Cox et al.   BMC BIOINFORMATICS

Planctomycetes dominate biofilms on surfaces of the kelp Laminaria hyperborea

(2010) Mia M Bengtsson et al.   BMC MICROBIOLOGY

Spatial patterns and light-driven variation of microbial population gene expression in surface waters of the oligotrophic open ocean

(2010) Ian Hewson et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial community succession and chemical profiles of subtidal biofilms in relation to larval settlement of the polychaete Hydroides elegans

(2010) Hong Chun Chung et al.   ISME Journal

Environmental proteomics of microbial plankton in a highly productive coastal upwelling system

(2010) Sarah M Sowell et al.   ISME Journal

Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean

(2010) Yanmei Shi et al.   ISME Journal

Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction

(2010) Robert M Morris et al.   ISME Journal

FragGeneScan: predicting genes in short and error-prone reads

(2010) Mina Rho et al.   NUCLEIC ACIDS RESEARCH

Metagenomic Sequencing of an In Vitro-Simulated Microbial Community

(2010) Jenna L. Morgan et al.   PLoS One

Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria

(2010) Terry C. Hazen et al.   SCIENCE

Surface Colonization by Marine Roseobacters: Integrating Genotype and Phenotype

(2009) R. N. Slightom et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Marine biofilms on submerged surfaces are a reservoir forEscherichia coliandVibrio cholerae

(2009) Nicholas J. Shikuma et al.   BIOFOULING

SOAP2: an improved ultrafast tool for short read alignment

(2009) R. Li et al.   BIOINFORMATICS

Diversity, ecology, and genomics of the Roseobacter clade: a short overview

(2008) Thorsten Brinkhoff et al.   ARCHIVES OF MICROBIOLOGY

The biology of biofouling diatoms and their role in the development of microbial slimes

(2008) Paul J. Molino et al.   BIOFOULING

Bacterial communities in the initial stage of marine biofilm formation on artificial surfaces

(2008) Jin-Woo Lee et al.   JOURNAL OF MICROBIOLOGY

The Sorcerer II Global Ocean Sampling Expedition: Metagenomic Characterization of Viruses within Aquatic Microbial Samples

(2008) Shannon J. Williamson et al.   PLoS One

Detection of Large Numbers of Novel Sequences in the Metatranscriptomes of Complex Marine Microbial Communities

(2008) Jack A. Gilbert et al.   PLoS One

Microbial community gene expression in ocean surface waters

(2008) J. Frias-Lopez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA