Prediction of high- and low-affinity quinol-analogue-binding sites in theaa3andbo3terminal oxidases fromBacillus subtilisandEscherichia coli

Interactions of Intermediate Semiquinone with Surrounding Protein Residues at the QH Site of Wild-Type and D75H Mutant Cytochrome bo3 from Escherichia coli

(2012) Myat T. Lin et al.   BIOCHEMISTRY

Two Tyrosyl Radicals Stabilize High Oxidation States in Cytochrome c Oxidase for Efficient Energy Conservation and Proton Translocation

(2012) Michelle A. Yu et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Crystal structure of quinol-dependent nitric oxide reductase from Geobacillus stearothermophilus

(2012) Yushi Matsumoto et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Allosteric interactions and proton conducting pathways in proton pumping aa3 oxidases: Heme a as a key coupling element

(2011) Nazzareno Capitanio et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Active site intermediates in the reduction of O2 by cytochrome oxidase, and their derivatives

(2011) Mårten Wikström   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

The superfamily of heme–copper oxygen reductases: Types and evolutionary considerations

(2011) Filipa L. Sousa et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Bioinformatics Classifier and Database for Heme-Copper Oxygen Reductases

(2011) Filipa L. Sousa et al.   PLoS One

Molecular dynamics in cytochrome c oxidase Mössbauer spectra deconvolution

(2010) Fabrizio Bossis et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

The quinone-binding sites of the cytochrome bo3 ubiquinol oxidase from Escherichia coli

(2010) Lai Lai Yap et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Computational approaches for protein function prediction: A combined strategy from multiple sequence alignment to molecular docking-based virtual screening

(2010) Ciro Leonardo Pierri et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Proton-Coupled Electron Transfer in Cytochrome Oxidase

(2010) Ville R. I. Kaila et al.   CHEMICAL REVIEWS

Characterization of the Semiquinone Radical Stabilized by the Cytochromeaa3-600 Menaquinol Oxidase ofBacillus subtilis

(2010) Sophia M. Yi et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

High resolution crystal structure of Paracoccus denitrificans cytochrome c oxidase: New insights into the active site and the proton transfer pathways

(2009) Juergen Koepke et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

pGenTHREADER and pDomTHREADER: new methods for improved protein fold recognition and superfamily discrimination

(2009) Anna Lobley et al.   BIOINFORMATICS

Antibiotics LL-Z1272 identified as novel inhibitors discriminating bacterial and mitochondrial quinol oxidases

(2008) Tatsushi Mogi et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Molecular Mechanism of Proton Translocation by Cytochrome c Oxidase

(2007) Ilya Belevich et al.   ANTIOXIDANTS & REDOX SIGNALING

Charge parameterization of the metal centers in cytochromecoxidase

(2007) Mikael P. Johansson et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY