Crucial Roles of Single Residues in Binding Affinity, Specificity, and Promiscuity in the Cellulosomal Cohesin-Dockerin Interface

Insights into a type III cohesin-dockerin recognition interface from the cellulose-degrading bacteriumRuminococcus flavefaciens

(2015) Jonathan Y. Weinstein et al.   JOURNAL OF MOLECULAR RECOGNITION

Establishment of a Simple Lactobacillus plantarum Cell Consortium for Cellulase-Xylanase Synergistic Interactions

(2013) Sarah Moraïs et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

A synthetic biology approach for evaluating the functional contribution of designer cellulosome components to deconstruction of cellulosic substrates

(2013) Yael Vazana et al.   Biotechnology for Biofuels

Computational design of protein–protein interactions

(2013) Gideon Schreiber et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Indirect ELISA-based approach for comparative measurement of high-affinity cohesin-dockerin interactions

(2012) Michal Slutzki et al.   JOURNAL OF MOLECULAR RECOGNITION

Deconstruction of Lignocellulose into Soluble Sugars by Native and Designer Cellulosomes

(2012) S. Morais et al.   mBio

Triathlon for energy functions: Who is the winner for design of protein-protein interactions?

(2011) Oz Sharabi et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Interplay between Clostridium thermocellum Family 48 and Family 9 Cellulases in Cellulosomal versus Noncellulosomal States

(2010) Y. Vazana et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Contribution of a Xylan-Binding Module to the Degradation of a Complex Cellulosic Substrate by Designer Cellulosomes

(2010) S. Morais et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Protein structure modelling and evaluation based on a 4-distance description of side-chain interactions

(2010) Vladimir Potapov et al.   BMC BIOINFORMATICS

Protein binding specificity versus promiscuity

(2010) Gideon Schreiber et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

The unique set of putative membrane-associated anti-σ factors in Clostridium thermocellum suggests a novel extracellular carbohydrate-sensing mechanism involved in gene regulation

(2010) Hamutal Kahel-Raifer et al.   FEMS MICROBIOLOGY LETTERS

Analysis of cohesin-dockerin interactions using mutant dockerin proteins

(2010) Kazutaka Sakka et al.   FEMS MICROBIOLOGY LETTERS

Glycoside hydrolases as components of putative carbohydrate biosensor proteins in Clostridium thermocellum

(2010) Liat Bahari et al.   JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY

Clostridium thermocellum cellulosomal genes are regulated by extracytoplasmic polysaccharides via alternative sigma factors

(2010) Y. Nataf et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Role of conformational sampling in computing mutation-induced changes in protein structure and stability

(2010) Elizabeth H. Kellogg et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Loops Govern SH2 Domain Specificity by Controlling Access to Binding Pockets

(2010) T. Kaneko et al.   Science Signaling

Effect of Linker Length and Dockerin Position on Conversion of a Thermobifida fusca Endoglucanase to the Cellulosomal Mode

(2009) J. Caspi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Unusual binding properties of the dockerin module ofClostridium thermocellumendoglucanase CelJ (Cel9D-Cel44A)

(2009) Kazutaka Sakka et al.   FEMS MICROBIOLOGY LETTERS

Computer-aided design of functional protein interactions

(2009) Daniel J Mandell et al.   Nature Chemical Biology

Following evolutionary paths to protein-protein interactions with high affinity and selectivity

(2009) Kalia Bernath Levin et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details

(2009) V. Potapov et al.   PROTEIN ENGINEERING DESIGN & SELECTION

Building a foundation for structure-based cellulosome design for cellulosic ethanol: Insight into cohesin-dockerin complexation from computer simulation

(2009) Jiancong Xu et al.   PROTEIN SCIENCE

Macromolecular Modeling with Rosetta

(2008) Rhiju Das et al.   Annual Review of Biochemistry

TheClostridium cellulolyticumDockerin Displays a Dual Binding Mode for Its Cohesin Partner

(2008) Benedita A. Pinheiro et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Conversion of Thermobifida fusca free exoglucanases into cellulosomal components: Comparative impact on cellulose-degrading activity

(2008) Jonathan Caspi et al.   JOURNAL OF BIOTECHNOLOGY

Predicting free energy changes using structural ensembles

(2008) Alexander Benedix et al.   NATURE METHODS

Built-in loops allow versatility in domain-domain interactions: Lessons from self-interacting domains

(2008) E. Akiva et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structural basis of Clostridium perfringens toxin complex formation

(2008) J. J. Adams et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cohesin-dockerin microarray: Diverse specificities between two complementary families of interacting protein modules

(2008) Rachel Haimovitz et al.   PROTEOMICS