Phylogeography of the Variable Dwarf-KingfisherCeyx Lepidus(Aves: Alcedinidae) inferred from mitochondrial and nuclear DNA sequences

Molecular phylogeny and insular biogeography of the lowland tailorbirds of Southeast Asia (Cisticolidae: Orthotomus)

(2012) Frederick H. Sheldon et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

jModelTest 2: more models, new heuristics and parallel computing

(2012) Diego Darriba et al.   NATURE METHODS

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Molecular systematics and species limits in the Philippine fantails (Aves: Rhipidura)

(2011) Luis A. Sánchez-González et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics

(2011) Daniel L. Ayres et al.   SYSTEMATIC BIOLOGY

DendroPy: a Python library for phylogenetic computing

(2010) J. Sukumaran et al.   BIOINFORMATICS

Cryptic genetic diversity in “widespread” Southeast Asian bird species suggests that Philippine avian endemism is gravely underestimated

(2010) David J. Lohman et al.   BIOLOGICAL CONSERVATION

Evolution in a tropical archipelago: comparative phylogeography of Philippine fauna and flora reveals complex patterns of colonization and diversification

(2010) ANDREW W. JONES et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Species boundaries and cryptic lineage diversity in a Philippine forest skink complex (Reptilia; Squamata; Scincidae: Lygosominae)

(2010) Charles W. Linkem et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Phylogeny and biogeography of Philippine bent-toed geckos (Gekkonidae: Cyrtodactylus) contradict a prevailing model of Pleistocene diversification

(2010) Cameron D. Siler et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Difference in Plumage Color Used in Species Recognition between Incipient Species Is Linked to a Single Amino Acid Substitution in the Melanocortin‐1 Receptor

(2009) J. Albert C. Uy et al.   AMERICAN NATURALIST

The role of repeated sea-level fluctuations in the generation of shrew (Soricidae: Crocidura) diversity in the Philippine Archipelago

(2009) Jacob A. Esselstyn et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Origin and diversification of Philippine bulbuls

(2009) Carl H. Oliveros et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

PLUMAGE CONVERGENCE AND EVOLUTIONARY HISTORY OF THE ISLAND THRUSH IN THE PHILIPPINES

(2008) ANDREW W. JONES et al.   CONDOR

A well-tested set of primers to amplify regions spread across the avian genome

(2008) Rebecca T. Kimball et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION