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Whole genome sequencing as a tool to investigate a cluster of seven cases of listeriosis in Austria and Germany, 2011–2013

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Controlling Hospital-Acquired Infection: Focus on the Role of the Environment and New Technologies for Decontamination

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A Multicentre Hospital Outbreak in Sweden Caused by Introduction of a vanB2 Transposon into a Stably Maintained pRUM-Plasmid in an Enterococcus faecium ST192 Clone

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Genomic Insights to Control the Emergence of Vancomycin-Resistant Enterococci

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The changing epidemiology of bacteraemias in Europe: trends from the European Antimicrobial Resistance Surveillance System

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Twenty-five years of shared life with vancomycin-resistant enterococci: is it time to divorce?

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Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study

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Transforming clinical microbiology with bacterial genome sequencing

(2012) Xavier Didelot et al.   NATURE REVIEWS GENETICS

Rapid Whole-Genome Sequencing for Investigation of a Neonatal MRSA Outbreak

(2012) Claudio U. Köser et al.   NEW ENGLAND JOURNAL OF MEDICINE

A pilot study of rapid benchtop sequencing ofStaphylococcus aureusandClostridium difficilefor outbreak detection and surveillance

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Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads

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Typing of vancomycin-resistant enterococci obtained from patients at Danish hospitals and detection of a genomic island specific to CC17 Enterococcus faecium

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Diversity of Tn1546 and Its Role in the Dissemination of Vancomycin-Resistant Enterococci in Portugal

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Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

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Emergence of ampicillin-resistant Enterococcus faecium in Danish hospitals

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