4.4 Article

Complete genome sequence of I¦CP51, a temperate bacteriophage of Clostridium perfringens

Journal

ARCHIVES OF VIROLOGY
Volume 158, Issue 9, Pages 2015-2017

Publisher

SPRINGER WIEN
DOI: 10.1007/s00705-013-1647-1

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Funding

  1. Biotechnology and Biological Sciences Research Council [BB/J004529/1]
  2. EU [FP7-KBBE-222720]
  3. University of Messina
  4. Biotechnology and Biological Sciences Research Council [BBS/E/F/00044453] Funding Source: researchfish
  5. BBSRC [BBS/E/F/00044453] Funding Source: UKRI

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During sequencing of the genome of Clostridium perfringens strain 5147-97, a putative prophage was identified, located within a gene for a proposed flavodoxin oxidoreductase. Mitomycin C induction of this strain released a bacteriophage whose morphological features examined by electron microscopy indicated it belonged to the family Siphoviridae. This phage was hence designated as vB_CpeS-CP51. The 39,108-bp genome includes 50 predicted open reading frames (ORFs), including two that may affect sporulation, and two predicted tRNAs. To determine the ends of the prophage, PCR was performed using primers facing outwards from the proposed end genes. This confirmed the presence of a circularised genome in PEG-precipitated bacteriophage particles.

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