The symbiotic life of Symbiodinium in the open ocean within a new species of calcifying ciliate (Tiarina sp.)

Spatially distinct and regionally endemic Symbiodinium assemblages in the threatened Caribbean reef-building coral Orbicella faveolata

(2015) Dustin W. Kemp et al.   CORAL REEFS

Symbiodinium tridacnidorumsp. nov., a dinoflagellate common to Indo-Pacific giant clams, and a revised morphological description ofSymbiodinium microadriaticumFreudenthal, emended Trench & Blank

(2015) Sung Yeon Lee et al.   EUROPEAN JOURNAL OF PHYCOLOGY

Eukaryotic plankton diversity in the sunlit ocean

(2015) C. de Vargas et al.   SCIENCE

Brandtodiniumgen. nov. andB. nutriculacomb. Nov. (Dinophyceae), a dinoflagellate commonly found in symbiosis with polycystine radiolarians

(2014) Ian Probert et al.   JOURNAL OF PHYCOLOGY

Community dynamics and physiology ofSymbiodiniumspp. before, during, and after a coral bleaching event

(2014) Dustin W. Kemp et al.   LIMNOLOGY AND OCEANOGRAPHY

New insights into the genetic diversity of zooxanthellae in Mediterranean anthozoans

(2014) Pilar Casado-Amezúa et al.   SYMBIOSIS

Multi-gene analysis ofSymbiodiniumdinoflagellates: a perspective on rarity, symbiosis, and evolution

(2014) Xavier Pochon et al.   PeerJ

GenBank

(2013) Dennis A. Benson et al.   NUCLEIC ACIDS RESEARCH

A single-cell view of ammonium assimilation in coral–dinoflagellate symbiosis

(2012) Mathieu Pernice et al.   ISME Journal

Cell Biology of Cnidarian-Dinoflagellate Symbiosis

(2012) S. K. Davy et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Identifying and Characterizing Alternative Molecular Markers for the Symbiotic and Free-Living Dinoflagellate Genus Symbiodinium

(2012) Xavier Pochon et al.   PLoS One

An original mode of symbiosis in open ocean plankton

(2012) J. Decelle et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Using Nuclear-encoded LSU and SSU rDNA Sequences to Identify the Eukaryotic Endosymbiont in Amphisolenia bidentata (Dinophyceae)

(2012) Niels Daugbjerg et al.   PROTIST

Act together—implications of symbioses in aquatic ciliates

(2012) Claudia Dziallas et al.   Frontiers in Microbiology

Concepts in protistology: Species definitions and boundaries

(2011) Jens Boenigk et al.   EUROPEAN JOURNAL OF PROTISTOLOGY

Whole-genome amplification (WGA) of marine photosynthetic eukaryote populations

(2011) Cécile Lepere et al.   FEMS MICROBIOLOGY ECOLOGY

Taxonomic descriptions of three marine colepid ciliates, Nolandia sinica spec. nov., Apocoleps caoi spec. nov. and Tiarina fusa (Claparede & Lachmann, 1858) Bergh, 1881 (Ciliophora, Prorodontida)

(2011) X. Chen et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Acquired Phototrophy in Ciliates: A Review of Cellular Interactions and Structural Adaptations1

(2011) MATTHEW D. JOHNSON   JOURNAL OF EUKARYOTIC MICROBIOLOGY

MOLECULAR PHYLOGENY OF DINOPHYSOID DINOFLAGELLATES: THE SYSTEMATIC POSITION OF OXYPHYSIS OXYTOXOIDES AND THE DINOPHYSIS HASTATA GROUP (DINOPHYSALES, DINOPHYCEAE)1

(2011) Fernando Gómez et al.   JOURNAL OF PHYCOLOGY

Control of phosphate uptake by zooxanthellae and host cells in the scleractinian coral Stylophora pistillata

(2011) C. Godinot et al.   LIMNOLOGY AND OCEANOGRAPHY

GeoSymbio: a hybrid, cloud-based web application of global geospatial bioinformatics and ecoinformatics for Symbiodinium-host symbioses

(2011) ERIK C. FRANKLIN et al.   Molecular Ecology Resources

A Holistic Approach to Marine Eco-Systems Biology

(2011) Eric Karsenti et al.   PLOS BIOLOGY

A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai’i

(2010) Xavier Pochon et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Increasing taxon sampling using both unidentified environmental sequences and identified cultures improves phylogenetic inference in the Prorodontida (Ciliophora, Prostomatea)

(2010) Zhenzhen Yi et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The endosymbiotic origin, diversification and fate of plastids

(2010) P. J. Keeling   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Mixotrophy in Ciliates

(2010) Genoveva F. Esteban et al.   PROTIST

Acquired phototrophy in aquatic protists

(2009) DK Stoecker et al.   AQUATIC MICROBIAL ECOLOGY

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Method for Studying Protistan Diversity Using Massively Parallel Sequencing of V9 Hypervariable Regions of Small-Subunit Ribosomal RNA Genes

(2009) Linda A. Amaral-Zettler et al.   PLoS One

Molecular Characterization of Ciliate Diversity in Stream Biofilms

(2008) A. Dopheide et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops

(2008) I. Milne et al.   BIOINFORMATICS

Do introduced endosymbiotic dinoflagellates ‘take’ to new hosts?

(2008) Todd C. LaJeunesse et al.   BIOLOGICAL INVASIONS

Morphology and Gene Sequence ofLevicoleps biwaen. gen., n. sp. (Ciliophora, Prostomatida), a Proposed Endemic from the Ancient Lake Biwa, Japan

(2008) WILHELM FOISSNER et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Worldwide biogeography of Symbiodinium in tropical octocorals

(2008) TL Goulet et al.   MARINE ECOLOGY PROGRESS SERIES

jModelTest: Phylogenetic Model Averaging

(2008) D. Posada   MOLECULAR BIOLOGY AND EVOLUTION

Metabolic interactions between algal symbionts and invertebrate hosts

(2008) DAVID YELLOWLEES et al.   PLANT CELL AND ENVIRONMENT