Shifts in Abundance and Diversity of Mobile Genetic Elements after the Introduction of Diverse Pesticides into an On-Farm Biopurification System over the Course of a Year

Cultivation-Independent Screening Revealed Hot Spots of IncP-1, IncP-7 and IncP-9 Plasmid Occurrence in Different Environmental Habitats

(2014) Simone Dealtry et al.   PLoS One

Increased Abundance and Transferability of Resistance Genes after Field Application of Manure from Sulfadiazine-Treated Pigs

(2013) Sven Jechalke et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

High prevalence of IncP-1 plasmids and IS1071insertion sequences in on-farm biopurification systems and other pesticide-polluted environments

(2013) Vincent Dunon et al.   FEMS MICROBIOLOGY ECOLOGY

Simultaneous pyrosequencing of the 16S rRNA, IncP-1 trfA, and merA genes

(2013) Peter N. Holmsgaard et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Quantification of IncP-1 Plasmid Prevalence in Environmental Samples

(2012) Sven Jechalke et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Dynamics of the Linuron HydrolaselibAGene Pool Size in Response to Linuron Application and Environmental Perturbations in Agricultural Soil and On-Farm Biopurification Systems

(2012) Karolien Bers et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Exploring the potential of biobeds for the depuration of pesticide-contaminated wastewaters from the citrus production chain: Laboratory, column and field studies

(2012) M. Omirou et al.   ENVIRONMENTAL POLLUTION

Broad-Host-Range Plasmids from Agricultural Soils Have IncP-1 Backbones with Diverse Accessory Genes

(2011) Diya Sen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Role of IncP-1β Plasmids pWDL7::rfpand pNB8c in Chloroaniline Catabolism as Determined by Genomic and Functional Analyses

(2011) J. E. Król et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

Removing Noise From Pyrosequenced Amplicons

(2011) Christopher Quince et al.   BMC BIOINFORMATICS

Molecular characterization of conjugative plasmids in pesticide tolerant and multi-resistant bacterial isolates from contaminated alluvial soil

(2011) Reshma Anjum et al.   CHEMOSPHERE

Antibiotic resistance gene spread due to manure application on agricultural fields

(2011) Holger Heuer et al.   CURRENT OPINION IN MICROBIOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Dissipation and metabolism of 14C-spiroxamine in soil under laboratory condition

(2010) Premasis Sukul et al.   ENVIRONMENTAL POLLUTION

Characterization of bacterial populations in Danish raw milk cheeses made with different starter cultures by denaturating gradient gel electrophoresis and pyrosequencing

(2010) Wafa Masoud et al.   INTERNATIONAL DAIRY JOURNAL

Biodegradation and Mineralization of Metolachlor and Alachlor by Candida xestobii

(2010) Ana Munoz et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

The Behavior and Significance of Degradative Plasmids Belonging to Inc Groups in Pseudomonas within Natural Environments and Microcosms

(2010) Masaki Shintani et al.   MICROBES AND ENVIRONMENTS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

All IncP-1 plasmid subgroups, including the novel ε subgroup, are prevalent in the influent of a Danish wastewater treatment plant

(2009) Martin Iain Bahl et al.   PLASMID

Diverse aadA gene cassettes on class 1 integrons introduced into soil via spread manure

(2009) Chu T.T. Binh et al.   RESEARCH IN MICROBIOLOGY

Wastewater bacterial communities bring together broad-host range plasmids, integrons and a wide diversity of uncharacterized gene cassettes

(2009) Alexandra Moura et al.   RESEARCH IN MICROBIOLOGY

Different Pathways to Acquiring Resistance Genes Illustrated by the Recent Evolution of IncW Plasmids

(2008) C. Revilla et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Sorption characteristics of pesticides on matrix substrates used in biopurification systems

(2008) Tineke De Wilde et al.   CHEMOSPHERE

Spreading antibiotic resistance through spread manure: characteristics of a novel plasmid type with low %G+C content

(2008) Holger Heuer et al.   ENVIRONMENTAL MICROBIOLOGY

Piggery manure used for soil fertilization is a reservoir for transferable antibiotic resistance plasmids

(2008) Chu Thi Thanh Binh et al.   FEMS MICROBIOLOGY ECOLOGY

Diversity of IncP-9 plasmids of Pseudomonas

(2008) Y. R. Sevastsyanovich et al.   MICROBIOLOGY-SGM