Metaproteomics Analysis Reveals the Adaptation Process for the Chicken Gut Microbiota

Chicken faecal microbiota and disturbances induced by single or repeated therapy with tetracycline and streptomycin

(2013) Petra Videnska et al.   BMC Veterinary Research

Comparative Metaproteomics and Diversity Analysis of Human Intestinal Microbiota Testifies for Its Temporal Stability and Expression of Core Functions

(2012) Carolin A. Kolmeder et al.   PLoS One

The intestinal microbiota and its modulation for Salmonella control in chickens

(2011) James R. Chambers et al.   FOOD RESEARCH INTERNATIONAL

A High-Confidence Human Plasma Proteome Reference Set with Estimated Concentrations in PeptideAtlas

(2011) Terry Farrah et al.   MOLECULAR & CELLULAR PROTEOMICS

Less label, more free: Approaches in label-free quantitative mass spectrometry

(2011) Karlie A. Neilson et al.   PROTEOMICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Quality control of inclusion bodies in Escherichia coli

(2010) Britta Jürgen et al.   Microbial Cell Factories

Gut Microbiota in Health and Disease

(2010) Inna Sekirov et al.   PHYSIOLOGICAL REVIEWS

Metagenomic Sequencing of an In Vitro-Simulated Microbial Community

(2010) Jenna L. Morgan et al.   PLoS One

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Improved results in proteomics by use of local and peptide-class specific false discovery rates

(2009) Lau Sennels et al.   BMC BIOINFORMATICS

 -Ketoglutarate Dehydrogenase and Glutamate Dehydrogenase Work in Tandem To Modulate the Antioxidant  -Ketoglutarate during Oxidative Stress in Pseudomonas fluorescens

(2009) R. J. Mailloux et al.   JOURNAL OF BACTERIOLOGY

Combination of FASP and StageTip-Based Fractionation Allows In-Depth Analysis of the Hippocampal Membrane Proteome

(2009) Jacek R. Wiśniewski et al.   JOURNAL OF PROTEOME RESEARCH

Comparison of Extensive Protein Fractionation and Repetitive LC-MS/MS Analyses on Depth of Analysis for Complex Proteomes

(2009) Huan Wang et al.   JOURNAL OF PROTEOME RESEARCH

Rapid Validation of Mascot Search Results via Stable Isotope Labeling, Pair Picking, and Deconvolution of Fragmentation Patterns

(2009) Samuel L. Volchenboum et al.   MOLECULAR & CELLULAR PROTEOMICS

Accurate determination of microbial diversity from 454 pyrosequencing data

(2009) Christopher Quince et al.   NATURE METHODS

Universal sample preparation method for proteome analysis

(2009) Jacek R Wiśniewski et al.   NATURE METHODS

Conservative Fragments in Bacterial 16S rRNA Genes and Primer Design for 16S Ribosomal DNA Amplicons in Metagenomic Studies

(2009) Yong Wang et al.   PLoS One

Molecular adaptation of sourdough Lactobacillus plantarum DC400 under co-cultivation with other lactobacilli

(2009) Raffaella Di Cagno et al.   RESEARCH IN MICROBIOLOGY

Molecular analysis of the gut microbiota of identical twins with Crohn's disease

(2008) Johan Dicksved et al.   ISME Journal

Shotgun metaproteomics of the human distal gut microbiota

(2008) Nathan C Verberkmoes et al.   ISME Journal

The recovery of Mycobacterium avium subspecies paratuberculosis from the intestine of infected ruminants for proteomic evaluation

(2008) Sharon Egan et al.   JOURNAL OF MICROBIOLOGICAL METHODS

High-resolution metagenomics targets specific functional types in complex microbial communities

(2008) Marina G Kalyuzhnaya et al.   NATURE BIOTECHNOLOGY

Factors Affecting Intestinal Health in Poultry

(2008) M. Yegani et al.   POULTRY SCIENCE