Complex Physiology and Compound Stress Responses during Fermentation of Alkali-Pretreated Corn Stover Hydrolysate by an Escherichia coli Ethanologen

Metabolome Remodeling during the Acidogenic-Solventogenic Transition in Clostridium acetobutylicum

(2011) Daniel Amador-Noguez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The evolution of metabolic networks of E. coli

(2011) David J Baumler et al.   BMC Systems Biology

Newly Identified Genetic Variations in Common Escherichia coli MG1655 Stock Cultures

(2011) P. L. Freddolino et al.   JOURNAL OF BACTERIOLOGY

Differential Molecular Responses of Rice and Wheat Coleoptiles to Anoxia Reveal Novel Metabolic Adaptations in Amino Acid Metabolism for Tissue Tolerance

(2011) R. N. Shingaki-Wells et al.   PLANT PHYSIOLOGY

Requirement of the Type II Secretion System for Utilization of Cellulosic Substrates by Cellvibrio japonicus

(2010) J. G. Gardner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Biofuel production in Escherichia coli: the role of metabolic engineering and synthetic biology

(2010) James M. Clomburg et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Effect of primary degradation–reaction products from Ammonia Fiber Expansion (AFEX)-treated corn stover on the growth and fermentation of Escherichia coli KO11

(2010) Ming W. Lau et al.   BIORESOURCE TECHNOLOGY

Multifaceted characterization of cell wall decomposition products formed during ammonia fiber expansion (AFEX) and dilute acid based pretreatments

(2010) Shishir P.S. Chundawat et al.   BIORESOURCE TECHNOLOGY

Simplified process for ethanol production from sugarcane bagasse using hydrolysate-resistant Escherichia coli strain MM160

(2010) C.C. Geddes et al.   BIORESOURCE TECHNOLOGY

Genome-derived minimal metabolic models for Escherichia coli MG1655 with estimated in vivo respiratory ATP stoichiometry

(2010) Hilal Taymaz-Nikerel et al.   BIOTECHNOLOGY AND BIOENGINEERING

Comparing the fermentation performance of Escherichia coli KO11, Saccharomyces cerevisiae 424A(LNH-ST) and Zymomonas mobilis AX101 for cellulosic ethanol production

(2010) Ming W Lau et al.   Biotechnology for Biofuels

Metabolic Engineering for Production of Biorenewable Fuels and Chemicals: Contributions of Synthetic Biology

(2010) Laura R. Jarboe et al.   JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY

Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli

(2010) Hani Goodarzi et al.   Molecular Systems Biology

EcoCyc: a comprehensive database of Escherichia coli biology

(2010) I. M. Keseler et al.   NUCLEIC ACIDS RESEARCH

Paradigm for industrial strain improvement identifies sodium acetate tolerance loci in Zymomonas mobilis and Saccharomyces cerevisiae

(2010) S. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Regulation of Arabinose and Xylose Metabolism in Escherichia coli

(2009) T. A. Desai et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Furfural Inhibits Growth by Limiting Sulfur Assimilation in Ethanologenic Escherichia coli Strain LY180

(2009) E. N. Miller et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cellulosic hydrolysate toxicity and tolerance mechanisms in Escherichia coli

(2009) Tirzah Y Mills et al.   Biotechnology for Biofuels

Deletion of methylglyoxal synthase gene (mgsA) increased sugar co-metabolism in ethanol-producing Escherichia coli

(2009) L. P. Yomano et al.   BIOTECHNOLOGY LETTERS

rNMR: open source software for identifying and quantifying metabolites in NMR spectra

(2009) Ian A. Lewis et al.   MAGNETIC RESONANCE IN CHEMISTRY

Genes restoring redox balance in fermentation-deficient E. coli NZN111

(2009) Amarjeet Singh et al.   METABOLIC ENGINEERING

An integrated network approach identifies the isobutanol response network of Escherichia coli

(2009) Mark P Brynildsen et al.   Molecular Systems Biology

Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli

(2009) Bryson D Bennett et al.   Nature Chemical Biology

Global discovery of adaptive mutations

(2009) Hani Goodarzi et al.   NATURE METHODS

Cellulosic ethanol production from AFEX-treated corn stover using Saccharomyces cerevisiae 424A(LNH-ST)

(2009) M. W. Lau et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Anaerobic Respiration in EngineeredEscherichia coliwith an Internal Electron Acceptor to Produce Fuel Ethanol

(2008) Joy Doran Peterson et al.   Annals of the New York Academy of Sciences

Butanol Tolerance in a Selection of Microorganisms

(2008) Eric P. Knoshaug et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Re-engineering Escherichia coli for ethanol production

(2008) L. P. Yomano et al.   BIOTECHNOLOGY LETTERS