Isolation of Specific Genomic Regions and Identification of Their Associated Molecules by Engineered DNA-Binding Molecule-Mediated Chromatin Immunoprecipitation (enChIP) Using the CRISPR System and TAL Proteins

Engineered CRISPR-Cas9 nucleases with altered PAM specificities

(2015) Benjamin P. Kleinstiver et al.   NATURE

A genome-wide analysis of Cas9 binding specificity using ChIP-seq and targeted sequence capture

(2015) Henriette O'Geen et al.   NUCLEIC ACIDS RESEARCH

A Critical Role of the Thy28-MYH9 Axis in B Cell-Specific Expression of the Pax5 Gene in Chicken B Cells

(2015) Toshitsugu Fujita et al.   PLoS One

Identification of Non-Coding RNAs Associated with Telomeres Using a Combination of enChIP and RNA Sequencing

(2015) Toshitsugu Fujita et al.   PLoS One

Efficient isolation of specific genomic regions retaining molecular interactions by the iChIP system using recombinant exogenous DNA-binding proteins

(2014) Toshitsugu Fujita et al.   BMC MOLECULAR BIOLOGY

A CRISPR view of development

(2014) Melissa M. Harrison et al.   GENES & DEVELOPMENT

Genome-wide binding of the CRISPR endonuclease Cas9 in mammalian cells

(2014) Xuebing Wu et al.   NATURE BIOTECHNOLOGY

Genome-wide analysis reveals characteristics of off-target sites bound by the Cas9 endonuclease

(2014) Cem Kuscu et al.   NATURE BIOTECHNOLOGY

Identification of Proteins Associated with an IFNγ-Responsive Promoter by a Retroviral Expression System for enChIP Using CRISPR

(2014) Toshitsugu Fujita et al.   PLoS One

Protospacer Adjacent Motif (PAM)-Distal Sequences Engage CRISPR Cas9 DNA Target Cleavage

(2014) Regina Cencic et al.   PLoS One

The new frontier of genome engineering with CRISPR-Cas9

(2014) J. A. Doudna et al.   SCIENCE

Efficient isolation of specific genomic regions and identification of associated proteins by engineered DNA-binding molecule-mediated chromatin immunoprecipitation (enChIP) using CRISPR

(2013) Toshitsugu Fujita et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression

(2013) Lei S. Qi et al.   CELL

Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems

(2013) James E. DiCarlo et al.   NUCLEIC ACIDS RESEARCH

RNA-Guided Human Genome Engineering via Cas9

(2013) P. Mali et al.   SCIENCE

Identification of telomere-associated molecules by engineered DNA-binding molecule-mediated chromatin immunoprecipitation (enChIP)

(2013) Toshitsugu Fujita et al.   Scientific Reports

Locus-Specific Proteomics by TChP: Targeted Chromatin Purification

(2013) Farzin Pourfarzad et al.   Cell Reports

A decade of 3C technologies: insights into nuclear organization

(2012) E. de Wit et al.   GENES & DEVELOPMENT

DNA–protein interactions: methods for detection and analysis

(2012) Bipasha Dey et al.   MOLECULAR AND CELLULAR BIOCHEMISTRY

ChAP-MS: A Method for Identification of Proteins and Histone Posttranslational Modifications at a Single Genomic Locus

(2012) Stephanie D. Byrum et al.   Cell Reports

Developmental Regulation of Chromatin Conformation by Hox Proteins in Drosophila

(2012) Marios Agelopoulos et al.   Cell Reports

Direct Identification of Insulator Components by Insertional Chromatin Immunoprecipitation

(2011) Toshitsugu Fujita et al.   PLoS One

TAL Effectors: Customizable Proteins for DNA Targeting

(2011) A. J. Bogdanove et al.   SCIENCE

Coordinate control of gene expression noise and interchromosomal interactions in a MAP kinase pathway

(2010) Emma McCullagh et al.   NATURE CELL BIOLOGY

Purification of Proteins Associated with Specific Genomic Loci

(2009) Jérôme Déjardin et al.   CELL

Insertional chromatin immunoprecipitation: A method for isolating specific genomic regions

(2009) Akemi Hoshino et al.   JOURNAL OF BIOSCIENCE AND BIOENGINEERING