Using ion purity scores for enhancing quantitative accuracy and precision in complex proteomics samples

Gas-phase purification enables accurate, multiplexed proteome quantification with isobaric tagging

(2011) Craig D Wenger et al.   NATURE METHODS

MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics

(2011) Lily Ting et al.   NATURE METHODS

Peptide Identification from Mixture Tandem Mass Spectra

(2010) Jian Wang et al.   MOLECULAR & CELLULAR PROTEOMICS

PROTEOMICS: Into the next decade

(2010) Michele J. Dunn   PROTEOMICS

Precursor Acquisition Independent From Ion Count: How to Dive Deeper into the Proteomics Ocean

(2009) Alexandre Panchaud et al.   ANALYTICAL CHEMISTRY

Deconvolution of Mixture Spectra from Ion-Trap Data-Independent-Acquisition Tandem Mass Spectrometry

(2009) Marshall Bern et al.   ANALYTICAL CHEMISTRY

Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures

(2009) Guo-Zhong Li et al.   PROTEOMICS

The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS

(2009) Scott J. Geromanos et al.   PROTEOMICS

The use of proteome similarity for the qualitative and quantitative profiling of reperfused myocardium☆

(2008) Johannes P.C. Vissers et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

Precursor-Ion Mass Re-Estimation Improves Peptide Identification on Hybrid Instruments

(2008) Roland Luethy et al.   JOURNAL OF PROTEOME RESEARCH

Quantitative Shotgun Proteomics of Enriched Heterocysts fromNostocsp. PCC 7120 Using 8-Plex Isobaric Peptide Tags

(2008) Saw Yen Ow et al.   JOURNAL OF PROTEOME RESEARCH

Absolute SILAC for Accurate Quantitation of Proteins in Complex Mixtures Down to the Attomole Level

(2008) Stefan Hanke et al.   JOURNAL OF PROTEOME RESEARCH

Influence of mass resolution on species matching in accurate mass and retention time (AMT) tag proteomics experiments

(2008) Christophe D. Masselon et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY