Article
Microbiology
Emmanuel C. Ogbonna, Henry R. Anderson, Patrick C. Beardslee, Priyanka Bheemreddy, Karl R. Schmitz
Summary: Drug-resistant tuberculosis infections pose a major challenge to global public health. The ClpC1 unfoldase has been identified as a promising antibacterial target. By identifying interaction partners of ClpC1 in a model mycobacterium, we can gain a better understanding of its physiological function and develop compounds that inhibit its essential cellular activities.
MICROBIOLOGY SPECTRUM
(2023)
Review
Biotechnology & Applied Microbiology
Marcel Passon, Stefaan De Smedt, Hristo L. Svilenov
Summary: In contrast to other species, cattle possess exceptional antibodies with ultra-long complementarity-determining regions (u1CDRs) that can consist of 40-70 amino acids. The bovine u1CDR is folded into a stalk and a disulfiderich knob domain, which enable binding to different antigens. This article summarizes the current knowledge of the u1CDR structure, discusses approaches to discover u1CDRs against novel antigens, and outlines protein engineering approaches inspired by natural u1CDRs. Furthermore, it highlights the potential of using isolated bovine knobs, known as picobodies, as small antigen-binding domains derived from natural antibodies.
BIOTECHNOLOGY ADVANCES
(2023)
Article
Biology
Sandra Olenic, Lim Heo, Michael Feig, Lee Kroos
Summary: This study reveals a novel mechanism of inhibition for intramembrane proteases, which has implications for relief from inhibition in vivo and the design of potential therapeutic inhibitors.
Article
Multidisciplinary Sciences
Shan Tang, Adam T. Beattie, Lucie Kafkova, Gianluca Petris, Nicolas Huguenin-Dezot, Marc Fiedler, Matthew Freeman, Jason W. Chin
Summary: This study proposes a strategy for creating mechanism-based, light-activated protease and hydrolase substrate traps, which can capture substrates of hydrolases in complex mixtures and live mammalian cells.
Article
Microbiology
Sandra Olenic, Fiona Buchanan, Jordyn VanPortfliet, Daniel Parrell, Lee Kroos
Summary: Intramembrane metalloproteases play important roles in regulating biological processes by cleaving membrane-associated substrates. The study found that two conserved proline residues in the predicted short loop of SpoIVFB are crucial for the interaction and cleavage of Pro-sigma(K). The functions of other conserved residues in the short loop are not well understood.
JOURNAL OF BACTERIOLOGY
(2022)
Article
Biochemistry & Molecular Biology
Peter A. Bell, Christopher M. Overall
Summary: Proteolytic processing, the most common post-translational modification, has a significant impact on protein function. By reanalyzing shotgun proteomics datasets, we found evidence of proteolytic processing in COVID-19, which provides valuable insights for studying protease function and virus-host interactions.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2023)
Article
Biochemistry & Molecular Biology
Elena S. Klimtchuk, Daniele Peterle, Esther Bullitt, Lawreen H. Connors, John R. Engen, Olga Gursky
Summary: This study explored 14 patient-derived and engineered proteins related to kappa 1-family germline genes IGKVLD-33*01 and IGKVLD-39*01. The results showed that the amyloid LC related to IGKVLD-33*01 was less stable and formed amyloid faster, while the amyloid LC related to IGKVLD-39*01 had similar stability and formed amyloid slower.
AMYLOID-JOURNAL OF PROTEIN FOLDING DISORDERS
(2023)