Inferring species trees from incongruent multi-copy gene trees using the Robinson-Foulds distance

Polynomial-Time Algorithms for Building a Consensus MUL-Tree

(2012) Yun Cui et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Angiosperm phylogeny: 17 genes, 640 taxa

(2011) Douglas E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Consistency Properties of Species Tree Inference by Minimizing Deep Coalescences

(2011) Cuong V. Than et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

A simulation study comparing supertree and combined analysis methods using SMIDGen

(2010) M Shel Swenson et al.   Algorithms for Molecular Biology

Robinson-Foulds Supertrees

(2010) Mukul S Bansal et al.   Algorithms for Molecular Biology

The Newick utilities: high-throughput phylogenetic tree processing in the UNIX shell

(2010) T. Junier et al.   BIOINFORMATICS

Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models

(2010) Mukul S Bansal et al.   BMC BIOINFORMATICS

Genome-Scale Phylogenetics: Inferring the Plant Tree of Life from 18,896 Gene Trees

(2010) J. Gordon Burleigh et al.   SYSTEMATIC BIOLOGY

STEM: species tree estimation using maximum likelihood for gene trees under coalescence

(2009) Laura S. Kubatko et al.   BIOINFORMATICS

What Is the Danger of the Anomaly Zone for Empirical Phylogenetics?

(2009) Huateng Huang et al.   SYSTEMATIC BIOLOGY

The Complexity of Deriving Multi-Labeled Trees from Bipartitions

(2008) Katharina T. Huber et al.   JOURNAL OF COMPUTATIONAL BIOLOGY