Comparison of Methods to Detect HIV Dual Infection

Massively parallel pyrosequencing in HIV research

(2009) Frederic D Bushman et al.   AIDS

Detection of low-frequency pretherapy chemokine (CXC motif) receptor 4 (CXCR4)-using HIV-1 with ultra-deep pyrosequencing

(2009) John Archer et al.   AIDS

HIV-1 evolution in gag and env is highly correlated but exhibits different relationships with viral load and the immune response

(2009) Anne Piantadosi et al.   AIDS

Use of Massive Parallel Pyrosequencing for Near Full-Length Characterization of a Unique HIV Type 1 BF Recombinant Associated with a Fatal Primary Infection

(2009) Alessandro Bruselles et al.   AIDS RESEARCH AND HUMAN RETROVIRUSES

Are All Subtypes Created Equal? The Effectiveness of Antiretroviral Therapy against Non–Subtype B HIV‐1

(2009) Sergei L. Kosakovsky Pond et al.   CLINICAL INFECTIOUS DISEASES

Windshield splatter analysis with the Galaxy metagenomic pipeline

(2009) S. Kosakovsky Pond et al.   GENOME RESEARCH

The efficiency of single genome amplification and sequencing is improved by quantitation and use of a bioinformatics tool

(2009) David M. Butler et al.   JOURNAL OF VIROLOGICAL METHODS

Low-Abundance HIV Drug-Resistant Viral Variants in Treatment-Experienced Persons Correlate with Historical Antiretroviral Use

(2009) Thuy Le et al.   PLoS One

Quantitative Deep Sequencing Reveals Dynamic HIV-1 Escape and Large Population Shifts during CCR5 Antagonist Therapy In Vivo

(2009) Athe M. N. Tsibris et al.   PLoS One

Examination of a Second Region of the HIV Type 1 Genome Reveals Additional Cases of Superinfection

(2008) Anne Piantadosi et al.   AIDS RESEARCH AND HUMAN RETROVIRUSES

Human Immunodeficiency Virus Type 1 Superinfection Occurs despite Relatively Robust Neutralizing Antibody Responses

(2008) C. A. Blish et al.   JOURNAL OF VIROLOGY

Deciphering Human Immunodeficiency Virus Type 1 Transmission and Early Envelope Diversification by Single-Genome Amplification and Sequencing

(2008) J. F. Salazar-Gonzalez et al.   JOURNAL OF VIROLOGY

Viral Population Estimation Using Pyrosequencing

(2008) Nicholas Eriksson et al.   PLoS Computational Biology