Detection of quasispecies variants predicted to use CXCR4 by ultra-deep pyrosequencing during early HIV infection

Improved Detection of CXCR4-Using HIV by V3 Genotyping: Application of Population-Based and “Deep” Sequencing to Plasma RNA and Proviral DNA

(2010) Luke C Swenson et al.   JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES

High sensitivity of specific genotypic tools for detection of X4 variants in antiretroviral-experienced patients suitable to be treated with CCR5 antagonists

(2010) E. Seclen et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Comparative determination of HIV-1 co-receptor tropism by Enhanced Sensitivity Trofile, gp120 V3-loop RNA and DNA genotyping

(2010) Mattia CF Prosperi et al.   Retrovirology

HIV-1 V3 envelope deep sequencing for clinical plasma specimens failing in phenotypic tropism assays

(2010) Ina Vandenbroucke et al.   AIDS Research and Therapy

Archived HIV-1 minority variants detected by ultra-deep pyrosequencing in provirus may be fully replication competent

(2009) Gabriella Rozera et al.   AIDS

Relationship Between HIV Coreceptor Tropism and Disease Progression in Persons With Untreated Chronic HIV Infection

(2009) Matthew Bidwell Goetz et al.   JAIDS-JOURNAL OF ACQUIRED IMMUNE DEFICIENCY SYNDROMES

High frequency of X4/DM-tropic viruses in PBMC samples from patients with primary HIV-1 subtype-B infection in 1996-2007: the French ANRS CO06 PRIMO Cohort Study

(2009) P. Frange et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

The Impact of HIV Tropism on Decreases in CD4 Cell Count, Clinical Progression, and Subsequent Response to a First Antiretroviral Therapy Regimen

(2008) Laura Waters et al.   CLINICAL INFECTIOUS DISEASES

HIV‐1 Tropism, Disease Progression, and Clinical Management

(2008) Harold Burger et al.   JOURNAL OF INFECTIOUS DISEASES

Emergence and Persistence of CXCR4‐Tropic HIV‐1 in a Population of Men from the Multicenter AIDS Cohort Study

(2008) James C. Shepherd et al.   JOURNAL OF INFECTIOUS DISEASES

Deciphering Human Immunodeficiency Virus Type 1 Transmission and Early Envelope Diversification by Single-Genome Amplification and Sequencing

(2008) J. F. Salazar-Gonzalez et al.   JOURNAL OF VIROLOGY

Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection

(2008) B. F. Keele et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA