DNA Methylation in Basal Metazoans: Insights from Ctenophores

DNA Methylation on N6-Adenine in C. elegans

(2015) Eric Lieberman Greer et al.   CELL

N6-Methyladenine DNA Modification in Drosophila

(2015) Guoqiang Zhang et al.   CELL

N6-Methyldeoxyadenosine Marks Active Transcription Start Sites in Chlamydomonas

(2015) Ye Fu et al.   CELL

Employing Phylogenomics to Resolve the Relationships among Cnidarians, Ctenophores, Sponges, Placozoans, and Bilaterians

(2015) N. V. Whelan et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Convergent evolution of neural systems in ctenophores

(2015) L. L. Moroz   JOURNAL OF EXPERIMENTAL BIOLOGY

Integrative analysis of 111 reference human epigenomes

(2015) Anshul Kundaje et al.   NATURE

Error, signal, and the placement of Ctenophora sister to all other animals

(2015) Nathan V. Whelan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genome-wide and single-base resolution DNA methylomes of the Pacific oyster Crassostrea gigas provide insight into the evolution of invertebrate CpG methylation

(2015) Xiaotong Wang et al.   BMC GENOMICS

Cytosine DNA Methylation Is Found in Drosophila melanogaster but Absent in Saccharomyces cerevisiae, Schizosaccharomyces pombe, and Other Yeast Species

(2014) Floriana Capuano et al.   ANALYTICAL CHEMISTRY

Understanding the relationship between DNA methylation and histone lysine methylation

(2014) Nathan R. Rose et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Invertebrate epigenomics: the brave new world of the spineless

(2014) O. Bogdanovi    Briefings in Functional Genomics

A context dependent role for DNA methylation in bivalves

(2014) M. R. Gavery et al.   Briefings in Functional Genomics

The dynamic DNA methylation cycle from egg to sperm in the honey bee Apis mellifera

(2014) R. A. Drewell et al.   DEVELOPMENT

DNA methylation dynamics during epigenetic reprogramming in the germline and preimplantation embryos

(2014) D. M. Messerschmidt et al.   GENES & DEVELOPMENT

Impacts of Pretranscriptional DNA Methylation, Transcriptional Transcription Factor, and Posttranscriptional microRNA Regulations on Protein Evolutionary Rate

(2014) Trees-Juen Chuang et al.   Genome Biology and Evolution

Genome-wide DNA methylation patterns in LSH mutant reveals de-repression of repeat elements and redundant epigenetic silencing pathways

(2014) Weishi Yu et al.   GENOME RESEARCH

Epigenetics and Evolution

(2014) I. Mendizabal et al.   INTEGRATIVE AND COMPARATIVE BIOLOGY

Enhanced memory persistence is blocked by a DNA methyltransferase inhibitor in the snail Lymnaea stagnalis

(2014) K. Lukowiak et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

The ctenophore genome and the evolutionary origins of neural systems

(2014) Leonid L. Moroz et al.   NATURE

A worldwide survey of genome sequence variation provides insight into the evolutionary history of the honeybee Apis mellifera

(2014) Andreas Wallberg et al.   NATURE GENETICS

RNA-directed DNA methylation: an epigenetic pathway of increasing complexity

(2014) Marjori A. Matzke et al.   NATURE REVIEWS GENETICS

The Dnmt2 RNA methyltransferase homolog of Geobacter sulfurreducens specifically methylates tRNA-Glu

(2014) Raghuvaran Shanmugam et al.   NUCLEIC ACIDS RESEARCH

Epigenetic inheritance and genome regulation: is DNA methylation linked to ploidy in haplodiploid insects?

(2014) K. M. Glastad et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

MOABS: model based analysis of bisulfite sequencing data

(2014) Deqiang Sun et al.   GENOME BIOLOGY

Genome-wide profiling of DNA methylation and gene expression in Crassostrea gigas male gametes

(2014) Claire E. Olson et al.   Frontiers in Physiology

Intronic Non-CG DNA hydroxymethylation and alternative mRNA splicing in honey bees

(2013) Pablo Cingolani et al.   BMC GENOMICS

Sperm, but Not Oocyte, DNA Methylome Is Inherited by Zebrafish Early Embryos

(2013) Lan Jiang et al.   CELL

DNA Methylation Is Crucial for the Early Development in the Oyster C. gigas

(2013) Guillaume Riviere et al.   MARINE BIOTECHNOLOGY

Global Epigenomic Reconfiguration During Mammalian Brain Development

(2013) R. Lister et al.   SCIENCE

The Genome of the Ctenophore Mnemiopsis leidyi and Its Implications for Cell Type Evolution

(2013) J. F. Ryan et al.   SCIENCE

Genome-wide and Caste-Specific DNA Methylomes of the Ants Camponotus floridanus and Harpegnathos saltator

(2012) Roberto Bonasio et al.   CURRENT BIOLOGY

Plasmodium falciparum RuvB1 is an active DNA helicase and translocates in the 5′–3′ direction

(2012) Moaz Ahmad et al.   GENE

The Evolution of Invertebrate Gene Body Methylation

(2012) S. Sarda et al.   MOLECULAR BIOLOGY AND EVOLUTION

Accumulation and loss of asymmetric non-CpG methylation during male germ-cell development

(2012) Tomoko Ichiyanagi et al.   NUCLEIC ACIDS RESEARCH

Structure-Based Mechanistic Insights into DNMT1-Mediated Maintenance DNA Methylation

(2012) J. Song et al.   SCIENCE

Birds do it, bees do it, worms and ciliates do it too: DNA methylation from unexpected corners of the tree of life

(2012) Soojin Yi   GENOME BIOLOGY

Epigenetic reprogramming in mouse pre-implantation development and primordial germ cells

(2011) M. Saitou et al.   DEVELOPMENT

The SNF2-like helicase HELLS mediates E2F3-dependent transcription and cellular transformation

(2011) Björn von Eyss et al.   EMBO JOURNAL

Regulation of mammalian DNA methyltransferases: a route to new mechanisms

(2011) Hélène Denis et al.   EMBO REPORTS

Conservation and divergence of DNA methylation in eukaryotes

(2011) Zhixi Su et al.   Epigenetics

Epigenetics in the unicellular parasiteEntamoeba histolytica

(2011) Ayala Tovy et al.   Future Microbiology

Oligomerization of DNMT3A Controls the Mechanism ofde NovoDNA Methylation

(2011) Celeste Holz-Schietinger et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

On the Evolutionary Origin of Eukaryotic DNA Methyltransferases and Dnmt2

(2011) Tomasz P. Jurkowski et al.   PLoS One

Insects as innovative models for functional studies of DNA methylation

(2011) Frank Lyko et al.   TRENDS IN GENETICS

Evolution of Eukaryotic DNA Methylation and the Pursuit of Safer Sex

(2010) Assaf Zemach et al.   CURRENT BIOLOGY

LSH and G9a/GLP complex are required for developmentally programmed DNA methylation

(2010) K. Myant et al.   GENOME RESEARCH

Involvement of DNA methylation in memory processing in the honey bee

(2010) Gabrielle A. Lockett et al.   NEUROREPORT

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored

(2010) D. Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Structure of DNMT1-DNA Complex Reveals a Role for Autoinhibition in Maintenance DNA Methylation

(2010) J. Song et al.   SCIENCE

Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation

(2010) A. Zemach et al.   SCIENCE

Bisulfite methylation profiling of large genomes

(2010) Jon Reinders et al.   Epigenomics

The DNA Methylome of Human Peripheral Blood Mononuclear Cells

(2010) Yingrui Li et al.   PLOS BIOLOGY

The Honey Bee Epigenomes: Differential Methylation of Brain DNA in Queens and Workers

(2010) Frank Lyko et al.   PLOS BIOLOGY

Finding the fifth base: Genome-wide sequencing of cytosine methylation

(2009) R. Lister et al.   GENOME RESEARCH

Human DNA methylomes at base resolution show widespread epigenomic differences

(2009) Ryan Lister et al.   NATURE

Lsh Participates in DNA Methylation and Silencing of Stem Cell Genes

(2009) Sichuan Xi et al.   STEM CELLS

Highly Integrated Single-Base Resolution Maps of the Epigenome in Arabidopsis

(2008) Ryan Lister et al.   CELL

DNA methylation is widespread across social Hymenoptera

(2008) Marcus R. Kronforst et al.   CURRENT BIOLOGY

Evolution of DNA-methylation machinery: DNA methyltransferases and methyl-DNA binding proteins in the amphioxus Branchiostoma floridae

(2008) Ricard Albalat   DEVELOPMENT GENES AND EVOLUTION

Transient cyclical methylation of promoter DNA

(2008) Sara Kangaspeska et al.   NATURE

Nutritional Control of Reproductive Status in Honeybees via DNA Methylation

(2008) R. Kucharski et al.   SCIENCE

What do unicellular organisms teach us about DNA methylation?

(2008) Hala Harony et al.   TRENDS IN PARASITOLOGY