An oxidative DNA “damage” and repair mechanism localized in the VEGF promoter is important for hypoxia-induced VEGF mRNA expression

Ligand-Dependent Enhancer Activation Regulated by Topoisomerase-I Activity

(2015) Janusz Puc et al.   CELL

Mitochondria in lung biology and pathology: more than just a powerhouse

(2014) Paul T. Schumacker et al.   AMERICAN JOURNAL OF PHYSIOLOGY-LUNG CELLULAR AND MOLECULAR PHYSIOLOGY

8-Oxoguanine DNA glycosylase-1-mediated DNA repair is associated with Rho GTPase activation and α-smooth muscle actin polymerization

(2014) Jixian Luo et al.   FREE RADICAL BIOLOGY AND MEDICINE

Innate Inflammation Induced by the 8-Oxoguanine DNA Glycosylase-1–KRAS–NF-κB Pathway

(2014) Leopoldo Aguilera-Aguirre et al.   JOURNAL OF IMMUNOLOGY

Activation of cellular signaling by 8-oxoguanine DNA glycosylase-1-initiated DNA base excision repair

(2013) Peter German et al.   DNA REPAIR

Transcription-coupled DNA supercoiling in defined protein systems and inE. coli topAmutant strains

(2013) Geraldine Fulcrand et al.   IUBMB LIFE

Promoter G-quadruplex sequences are targets for base oxidation and strand cleavage during hypoxia-induced transcription

(2012) David W. Clark et al.   FREE RADICAL BIOLOGY AND MEDICINE

Activation of Ras Signaling Pathway by 8-Oxoguanine DNA Glycosylase Bound to Its Excision Product, 8-Oxoguanine

(2012) Istvan Boldogh et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Topoisomerase IIβ regulates base excision repair capacity of neurons

(2012) K. Preeti Gupta et al.   MECHANISMS OF AGEING AND DEVELOPMENT

Systematic Localization of Common Disease-Associated Variation in Regulatory DNA

(2012) M. T. Maurano et al.   SCIENCE

Perinuclear Mitochondrial Clustering Creates an Oxidant-Rich Nuclear Domain Required for Hypoxia-Induced Transcription

(2012) A.-B. Al-Mehdi et al.   Science Signaling

Overview of Base Excision Repair Biochemistry

(2011) Yun-Jeong Kim et al.   Current Molecular Pharmacology

Microindel detection in short-read sequence data

(2010) Peter Krawitz et al.   BIOINFORMATICS

The DNA glycosylase Ogg1 defends against oxidant-induced mtDNA damage and apoptosis in pulmonary artery endothelial cells

(2010) Mykhaylo V. Ruchko et al.   FREE RADICAL BIOLOGY AND MEDICINE

Gene expression of the liver in response to chronic hypoxia

(2010) Monica M. Baze et al.   PHYSIOLOGICAL GENOMICS

Intermittent and sustained hypoxia induce a similar gene expression profile in human aortic endothelial cells

(2010) Vsevolod Y. Polotsky et al.   PHYSIOLOGICAL GENOMICS

Hypoxia-induced oxidative base modifications in the VEGF hypoxia-response element are associated with transcriptionally active nucleosomes

(2008) Mykhaylo V. Ruchko et al.   FREE RADICAL BIOLOGY AND MEDICINE

DNA Oxidation as Triggered by H3K9me2 Demethylation Drives Estrogen-Induced Gene Expression

(2008) B. Perillo et al.   SCIENCE

Nuclear protein-induced bending and flexing of the hypoxic response element of the rat vascular endothelial growth factor promoter

(2007) Jeffrey F. Breit et al.   FASEB JOURNAL