Improved crystallographic models through iterated local density-guided model deformation and reciprocal-space refinement

Application of DEN refinement and automated model building to a difficult case of molecular-replacement phasing: the structure of a putative succinyl-diaminopimelate desuccinylase fromCorynebacterium glutamicum

(2012) Axel T. Brunger et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Use of knowledge-based restraints inphenix.refineto improve macromolecular refinement at low resolution

(2012) Jeffrey J. Headd et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Evaluating the solution fromMrBUMPandBALBES

(2011) Ronan M. Keegan et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

REFMAC5 for the refinement of macromolecular crystal structures

(2011) Garib N. Murshudov et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Cloning, expression, purification, crystallization and preliminary X-ray diffraction data of thePyrococcus horikoshiiRadA intein

(2011) Andrzej Lyskowski et al.   Acta Crystallographica Section F-Structural Biology and Crystallization Communications

Improved molecular replacement by density- and energy-guided protein structure optimization

(2011) Frank DiMaio et al.   NATURE

Crystal structure of XMRV protease differs from the structures of other retropepsins

(2011) Mi Li et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Structure of the catalytic domain of glucuronoyl esterase Cip2 from Hypocrea jecorina

(2011) Phani Raj Pokkuluri et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Improved Technologies Now Routinely Provide Protein NMR Structures Useful for Molecular Replacement

(2011) Binchen Mao et al.   STRUCTURE

Percentile-based spread: a more accurate way to compare crystallographic models

(2010) Edwin Pozharski   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Recent developments in classical density modification

(2010) Kevin Cowtan   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

PHENIX: a comprehensive Python-based system for macromolecular structure solution

(2010) Paul D. Adams et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Super-resolution biomolecular crystallography with low-resolution data

(2010) Gunnar F. Schröder et al.   NATURE

Automatic multiple-zone rigid-body refinement with a large convergence radius

(2009) Pavel V. Afonine et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7

(2008) Gerrit Langer et al.   Nature Protocols

Improving NMR protein structure quality by Rosetta refinement: A molecular replacement study

(2008) Theresa A. Ramelot et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS