Considerations for the development and application of control materials to improve metagenomic microbial community profiling

Metagenomic Analyses of Drinking Water Receiving Different Disinfection Treatments

(2012) Vicente Gomez-Alvarez et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenomics and probiotics

(2012) M. Gueimonde et al.   CLINICAL MICROBIOLOGY AND INFECTION

The layout of a bacterial genome

(2012) François Képès et al.   FEBS LETTERS

A framework for human microbiome research

(2012)   NATURE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

Unlocking the potential of metagenomics through replicated experimental design

(2012) Rob Knight et al.   NATURE BIOTECHNOLOGY

Comparison of DNA Extraction Methods for Microbial Community Profiling with an Application to Pediatric Bronchoalveolar Lavage Samples

(2012) Dana Willner et al.   PLoS One

Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability

(2012) A. Marchetti et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance

(2012) Steven W. Kembel et al.   PLoS Computational Biology

Evaluation of Digital PCR for Absolute DNA Quantification

(2011) Rebecca Sanders et al.   ANALYTICAL CHEMISTRY

Molecular diagnostics: harmonization through reference materials, documentary standards and proficiency testing

(2011) Marcia J Holden et al.   EXPERT REVIEW OF MOLECULAR DIAGNOSTICS

Integrative analysis of environmental sequences using MEGAN4

(2011) D. H. Huson et al.   GENOME RESEARCH

Metagenomics of the Water Column in the Pristine Upper Course of the Amazon River

(2011) Rohit Ghai et al.   PLoS One

Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen

(2011) M. Hess et al.   SCIENCE

De novo assembly of short sequence reads

(2010) K. Paszkiewicz et al.   BRIEFINGS IN BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Functional Genomics for Food Fermentation Processes

(2010) E.J. Smid et al.   Annual Review of Food Science and Technology

Quantification of the Detrimental Effect of a Single Primer-Template Mismatch by Real-Time PCR Using the 16S rRNA Gene as an Example

(2008) D. Bru et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Database indexing for production MegaBLAST searches

(2008) Aleksandr Morgulis et al.   BIOINFORMATICS

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Development of working reference materials for clinical virology

(2008) Jacqueline F. Fryer et al.   JOURNAL OF CLINICAL VIROLOGY