Gene-based predictive models of trophic modes suggest Asgard archaea are not phagocytotic

Ultrastructural characterization of the host–parasite interface between Allomyces anomalus (Blastocladiomycota) and Rozella allomycis (Cryptomycota)

(2017) Martha J. Powell et al.   Fungal Biology

Asgard archaea illuminate the origin of eukaryotic cellular complexity

(2017) Katarzyna Zaremba-Niedzwiedzka et al.   NATURE

Probing the evolution, ecology and physiology of marine protists using transcriptomics

(2016) David A. Caron et al.   NATURE REVIEWS MICROBIOLOGY

Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

(2016) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

WASH drives early recycling from macropinosomes and phagosomes to maintain surface phagocytic receptors

(2016) Catherine M. Buckley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial Vesicle Secretion and the Evolutionary Origin of the Eukaryotic Endomembrane System

(2016) Sven B. Gould et al.   TRENDS IN MICROBIOLOGY

Birth of the eukaryotes by a set of reactive innovations: New insights force us to relinquish gradual models

(2015) Dave Speijer   BIOESSAYS

Comparative Genomics of a Bacterivorous Green Alga Reveals Evolutionary Causalities and Consequences of Phago-Mixotrophic Mode of Nutrition

(2015) John A. Burns et al.   Genome Biology and Evolution

Complex archaea that bridge the gap between prokaryotes and eukaryotes

(2015) Anja Spang et al.   NATURE

HMMER web server: 2015 update

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

CLAP: A web-server for automatic classification of proteins with special reference to multi-domain proteins

(2014) Mutharasu Gnanavel et al.   BMC BIOINFORMATICS

The Neomuran Revolution and Phagotrophic Origin of Eukaryotes and Cilia in the Light of Intracellular Coevolution and a Revised Tree of Life

(2014) T. Cavalier-Smith   Cold Spring Harbor Perspectives in Biology

From archaeon to eukaryote: the evolutionary dark ages of the eukaryotic cell

(2013) Joran Martijn et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Molecular paleontology and complexity in the last eukaryotic common ancestor

(2013) V. Lila Koumandou et al.   CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY

A Modern Descendant of Early Green Algal Phagotrophs

(2013) Shinichiro Maruyama et al.   CURRENT BIOLOGY

Widespread decay of vitamin-related pathways: coincidence or consequence?

(2013) Katherine E. Helliwell et al.   TRENDS IN GENETICS

The juvenile Batten disease protein, CLN3, and its role in regulating anterograde and retrograde post-Golgi trafficking

(2012) Susan L Cotman et al.   Clinical Lipidology

The Cell Biology of Phagocytosis

(2011) Ronald S. Flannagan et al.   Annual Review of Pathology-Mechanisms of Disease

Interactive metagenomic visualization in a Web browser

(2011) Brian D Ondov et al.   BMC BIOINFORMATICS

Amino acids biosynthesis and nitrogen assimilation pathways: a great genomic deletion during eukaryotes evolution

(2011) RLM Guedes et al.   BMC GENOMICS

Structure and function of focal adhesions

(2011) Bernhard Wehrle-Haller   CURRENT OPINION IN CELL BIOLOGY

The mammalian actin-binding protein 1 (mAbp1): a novel molecular player in leukocyte biology

(2011) Jürgen Schymeinsky et al.   TRENDS IN CELL BIOLOGY

Molecular characterization of the evolution of phagosomes

(2010) Jonathan Boulais et al.   Molecular Systems Biology

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Phagotrophy in the origins of photosynthesis in eukaryotes and as a complementary mode of nutrition in phototrophs: relation to Darwin's insectivorous plants

(2009) J. A. Raven et al.   JOURNAL OF EXPERIMENTAL BOTANY

Uncovering metabolic pathways relevant to phenotypic traits of microbial genomes

(2009) Gabi Kastenmüller et al.   GENOME BIOLOGY

Entamoeba histolytica Phagocytosis of Human Erythrocytes Involves PATMK, a Member of the Transmembrane Kinase Family

(2008) Douglas R. Boettner et al.   PLoS Pathogens