Metabolomic signatures distinguish the impact of formula carbohydrates on disease outcome in a preterm piglet model of NEC

Human milk oligosaccharide composition predicts risk of necrotising enterocolitis in preterm infants

(2017) Chloe A Autran et al.   GUT

Intestinal dysbiosis in preterm infants preceding necrotizing enterocolitis: a systematic review and meta-analysis

(2017) Mohan Pammi et al.   Microbiome

OptiClust, an Improved Method for Assigning Amplicon-Based Sequence Data to Operational Taxonomic Units

(2017) Sarah L. Westcott et al.   mSphere

Gut bacteria dysbiosis and necrotising enterocolitis in very low birthweight infants: a prospective case-control study

(2016) Barbara B Warner et al.   LANCET

Antibiotics, birth mode, and diet shape microbiome maturation during early life

(2016) Nicholas A. Bokulich et al.   Science Translational Medicine

Enteric Neuronal Regulation of Intestinal Inflammation

(2016) Kara Gross Margolis et al.   TRENDS IN NEUROSCIENCES

Metagenomic Sequencing with Strain-Level Resolution Implicates Uropathogenic E. coli in Necrotizing Enterocolitis and Mortality in Preterm Infants

(2016) Doyle V. Ward et al.   Cell Reports

Differential Impact of Lactose/Lactase Phenotype on Colonic Microflora

(2016) Andrew Szilagyi et al.   CANADIAN JOURNAL OF GASTROENTEROLOGY

Comparing Apples and Oranges?: Next Generation Sequencing and Its Impact on Microbiome Analysis

(2016) Adam G. Clooney et al.   PLoS One

Platelet Lipidomic Profiling: Novel Insight into Cytosolic Phospholipase A2α Activity and Its Role in Human Platelet Activation

(2015) Matthew T. Duvernay et al.   BIOCHEMISTRY

Dynamics and Stabilization of the Human Gut Microbiome during the First Year of Life

(2015) Fredrik Bäckhed et al.   Cell Host & Microbe

Clostridium butyricumStrains and Dysbiosis Linked to Necrotizing Enterocolitis in Preterm Neonates

(2015) Nadim Cassir et al.   CLINICAL INFECTIOUS DISEASES

How informative is the mouse for human gut microbiota research?

(2015) T. L. A. Nguyen et al.   Disease Models & Mechanisms

Analyses of Intestinal Microbiota: Culture versus Sequencing: Figure 1

(2015) Andreas Hiergeist et al.   ILAR JOURNAL

The metabolomics of necrotising enterocolitis in preterm babies: an exploratory study

(2015) Amy Wilcock et al.   Journal of Maternal-Fetal & Neonatal Medicine

Metabolomic and proteomic analysis of serum from preterm infants with necrotising entercolitis and late-onset sepsis

(2015) Christopher J Stewart et al.   PEDIATRIC RESEARCH

Diet shapes the gut microbiome of pigs during nursing and weaning

(2015) Steven A. Frese et al.   Microbiome

Bacterial diversity and Clostridia abundance decrease with increasing severity of necrotizing enterocolitis

(2015) Valarie E McMurtry et al.   Microbiome

Low Abdominal NIRS Values and Elevated Plasma Intestinal Fatty Acid-Binding Protein in a Premature Piglet Model of Necrotizing Enterocolitis

(2015) Irving J. Zamora et al.   PLoS One

Bifidobacterium longum subspecies infantis: champion colonizer of the infant gut

(2014) Mark A. Underwood et al.   PEDIATRIC RESEARCH

Meconium Microbiome Analysis Identifies Bacteria Correlated with Premature Birth

(2014) Alexandria N. Ardissone et al.   PLoS One

Delayed Initiation but Not Gradual Advancement of Enteral Formula Feeding Reduces the Incidence of Necrotizing Enterocolitis (NEC) in Preterm Pigs

(2014) Nada Ghoneim et al.   PLoS One

Mucosa-Associated Bacterial Diversity in Necrotizing Enterocolitis

(2014) Rachel Brower-Sinning et al.   PLoS One

Patterned progression of bacterial populations in the premature infant gut

(2014) P. S. La Rosa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Placenta Harbors a Unique Microbiome

(2014) K. Aagaard et al.   Science Translational Medicine

Dual purpose use of preterm piglets as a model of pediatric GI disease

(2014) Berthe C. Oosterloo et al.   VETERINARY IMMUNOLOGY AND IMMUNOPATHOLOGY

Antibiotics modulate intestinal immunity and prevent necrotizing enterocolitis in preterm neonatal piglets

(2013) Michael L. Jensen et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

The individual-specific and diverse nature of the preterm infant microbiota

(2013) Eoin Barrett et al.   Archives of Disease in Childhood-Fetal and Neonatal Edition

Exploring host-microbiota interactions in animal models and humans

(2013) A. D. Kostic et al.   GENES & DEVELOPMENT

Decreased gut microbiota diversity, delayed Bacteroidetes colonisation and reduced Th1 responses in infants delivered by Caesarean section

(2013) Hedvig E Jakobsson et al.   GUT

Invited Review: The preterm pig as a model in pediatric gastroenterology

(2013) P. T. Sangild et al.   JOURNAL OF ANIMAL SCIENCE

GLP-2 Delays but Does Not Prevent the Onset of Necrotizing Enterocolitis in Preterm Pigs

(2013) Nancy M. Benight et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

Randomized Trial of Exclusive Human Milk versus Preterm Formula Diets in Extremely Premature Infants

(2013) Elizabeth A. Cristofalo et al.   JOURNAL OF PEDIATRICS

Bacterial Diversity in Meconium of Preterm Neonates and Evolution of Their Fecal Microbiota during the First Month of Life

(2013) Laura Moles et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Development of the Preterm Gut Microbiome in Twins at Risk of Necrotising Enterocolitis and Sepsis

(2013) Christopher J. Stewart et al.   PLoS One

Microbiome Assembly across Multiple Body Sites in Low-Birthweight Infants

(2013) E. K. Costello et al.   mBio

Early microbial and metabolomic signatures predict later onset of necrotizing enterocolitis in preterm infants

(2013) Ardythe L Morrow et al.   Microbiome

Bacterial community structure and functional contributions to emergence of health or necrotizing enterocolitis in preterm infants

(2013) Erika C Claud et al.   Microbiome

The preterm gut microbiota: changes associated with necrotizing enterocolitis and infection

(2012) CJ Stewart et al.   ACTA PAEDIATRICA

Gut Immune Maturation Depends on Colonization with a Host-Specific Microbiota

(2012) Hachung Chung et al.   CELL

Indoleamine 2,3 dioxygenase in intestinal disease

(2012) Matthew A. Ciorba   CURRENT OPINION IN GASTROENTEROLOGY

Human milk oligosaccharides: Every baby needs a sugar mama

(2012) L. Bode   GLYCOBIOLOGY

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

Effect of lactose on gut microbiota and metabolome of infants with cow’s milk allergy

(2012) Ruggiero Francavilla et al.   PEDIATRIC ALLERGY AND IMMUNOLOGY

Community analysis of bacteria colonizing intestinal tissue of neonates with necrotizing enterocolitis

(2011) Birgitte Smith et al.   BMC MICROBIOLOGY

Establishment and development of intestinal microbiota in preterm neonates

(2011) Silvia Arboleya et al.   FEMS MICROBIOLOGY ECOLOGY

Necrotizing Enterocolitis

(2011) Josef Neu et al.   NEW ENGLAND JOURNAL OF MEDICINE

Fecal Microbiota in Premature Infants Prior to Necrotizing Enterocolitis

(2011) Volker Mai et al.   PLoS One

Inducible Foxp3+ regulatory T-cell development by a commensal bacterium of the intestinal microbiota

(2010) J. L. Round et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Succession of microbial consortia in the developing infant gut microbiome

(2010) J. E. Koenig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Induction of Colonic Regulatory T Cells by Indigenous Clostridium Species

(2010) K. Atarashi et al.   SCIENCE

Carbohydrate maldigestion induces necrotizing enterocolitis in preterm pigs

(2009) Thomas Thymann et al.   AMERICAN JOURNAL OF PHYSIOLOGY-GASTROINTESTINAL AND LIVER PHYSIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Induction of Intestinal Th17 Cells by Segmented Filamentous Bacteria

(2009) Ivaylo I. Ivanov et al.   CELL

16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis

(2009) Yunwei Wang et al.   ISME Journal

Role of human milk in extremely low birth weight infants’ risk of necrotizing enterocolitis or death

(2008) J Meinzen-Derr et al.   Journal of Perinatology