Single-particle XFEL 3D reconstruction of ribosome-size particles based on Fourier slice matching: requirements to reach subnanometer resolution

Conformational landscape of a virus by single-particle X-ray scattering

(2017) Ahmad Hosseinizadeh et al.   NATURE METHODS

Reconstruction from limited single-particle diffraction data via simultaneous determination of state, orientation, intensity, and phase

(2017) Jeffrey J. Donatelli et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Three-dimensional reconstruction for coherent diffraction patterns obtained by XFEL

(2017) Miki Nakano et al.   JOURNAL OF SYNCHROTRON RADIATION

Coherent soft X-ray diffraction imaging of coliphage PR772 at the Linac coherent light source

(2017) Hemanth K.N. Reddy et al.   Scientific Data

Hybrid approach for structural modeling of biological systems from X-ray free electron laser diffraction patterns

(2016) Atsushi Tokuhisa et al.   JOURNAL OF STRUCTURAL BIOLOGY

Dragonfly: an implementation of the expand–maximize–compress algorithm for single-particle imaging

(2016) Kartik Ayyer et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

A Primer to Single-Particle Cryo-Electron Microscopy

(2015) Yifan Cheng et al.   CELL

Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly

(2015) Yury S Polikanov et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Three-Dimensional Reconstruction of the Giant Mimivirus Particle with an X-Ray Free-Electron Laser

(2015) Tomas Ekeberg et al.   PHYSICAL REVIEW LETTERS

Coherent X-Ray Diffraction Imaging of Chloroplasts fromCyanidioschyzon merolaeby Using X-Ray Free Electron Laser

(2015) Yuki Takayama et al.   PLANT AND CELL PHYSIOLOGY

Beyond crystallography: Diffractive imaging using coherent x-ray light sources

(2015) J. Miao et al.   SCIENCE

A fast iterative convolution weighting approach for gridding-based direct Fourier three-dimensional reconstruction with correction for the contrast transfer function

(2015) V. Abrishami et al.   ULTRAMICROSCOPY

Imaging single cells in a beam of live cyanobacteria with an X-ray laser

(2015) Gijs van der Schot et al.   Nature Communications

Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly

(2015) Yury S Polikanov et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Overview of the SACLA facility

(2015) Makina Yabashi et al.   JOURNAL OF SYNCHROTRON RADIATION

The linac coherent light source single particle imaging road map

(2015) A. Aquila et al.   Structural Dynamics

Native structure of photosystem II at 1.95 Å resolution viewed by femtosecond X-ray pulses

(2014) Michihiro Suga et al.   NATURE

Determination of damage-free crystal structure of an X-ray–sensitive protein using an XFEL

(2014) Kunio Hirata et al.   NATURE METHODS

Conformations of macromolecules and their complexes from heterogeneous datasets

(2014) P. Schwander et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

High-resolution structure of viruses from random diffraction snapshots

(2014) A. Hosseinizadeh et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Imaging live cell in micro-liquid enclosure by X-ray laser diffraction

(2014) Takashi Kimura et al.   Nature Communications

Single-shot three-dimensional structure determination of nanocrystals with femtosecond X-ray free-electron laser pulses

(2014) Rui Xu et al.   Nature Communications

Macromolecular structures probed by combining single-shot free-electron laser diffraction with synchrotron coherent X-ray imaging

(2014) Marcus Gallagher-Jones et al.   Nature Communications

Selection and orientation of different particles in single particle imaging

(2013) Miklós Tegze et al.   JOURNAL OF STRUCTURAL BIOLOGY

Xmipp 3.0: An improved software suite for image processing in electron microscopy

(2013) J.M. de la Rosa-Trevín et al.   JOURNAL OF STRUCTURAL BIOLOGY

Classifying and assembling two-dimensional X-ray laser diffraction patterns of a single particle to reconstruct the three-dimensional diffraction intensity function: resolution limit due to the quantum noise

(2012) Atsushi Tokuhisa et al.   ACTA CRYSTALLOGRAPHICA SECTION A

Atomic structure of a single large biomolecule from diffraction patterns of random orientations

(2012) Miklós Tegze et al.   JOURNAL OF STRUCTURAL BIOLOGY

Femtosecond X-ray protein nanocrystallography

(2011) Henry N. Chapman et al.   NATURE

Single mimivirus particles intercepted and imaged with an X-ray laser

(2011) M. Marvin Seibert et al.   NATURE

Data preparation and evaluation techniques for x-ray diffraction microscopy

(2010) Jan Steinbrener et al.   OPTICS EXPRESS

Quantitative 3D imaging of whole, unstained cells by using X-ray diffraction microscopy

(2010) H. Jiang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Image processing for electron microscopy single-particle analysis using XMIPP

(2008) Sjors H W Scheres et al.   Nature Protocols

Three-Dimensional Coherent X-Ray Diffraction Imaging of a Ceramic Nanofoam: Determination of Structural Deformation Mechanisms

(2008) A. Barty et al.   PHYSICAL REVIEW LETTERS

Crystal structure of a translation termination complex formed with release factor RF2

(2008) A. Korostelev et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cryo-EM image alignment based on nonuniform fast Fourier transform

(2008) Zhengfan Yang et al.   ULTRAMICROSCOPY