Comparative Chloroplast Genomics of Gossypium Species: Insights Into Repeat Sequence Variations and Phylogeny
Published 2018 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Comparative Chloroplast Genomics of Gossypium Species: Insights Into Repeat Sequence Variations and Phylogeny
Authors
Keywords
-
Journal
Frontiers in Plant Science
Volume 9, Issue -, Pages -
Publisher
Frontiers Media SA
Online
2018-03-21
DOI
10.3389/fpls.2018.00376
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Molecular evolution of the plastid genome during diversification of the cotton genus
- (2017) Zhiwen Chen et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Entire nucleotide sequences of Gossypium raimondii and G. arboreum mitochondrial genomes revealed A-genome species as cytoplasmic donor of the allotetraploid species
- (2017) Z. Chen et al. PLANT BIOLOGY
- A New Species of Cotton from Wake Atoll, Gossypium stephensii (Malvaceae)
- (2017) Joseph P. Gallagher et al. SYSTEMATIC BOTANY
- Dynamics of Chloroplast Translation during Chloroplast Differentiation in Maize
- (2016) Prakitchai Chotewutmontri et al. PLoS Genetics
- The Complete Chloroplast Genome Sequences of Five Epimedium Species: Lights into Phylogenetic and Taxonomic Analyses
- (2016) Yanjun Zhang et al. Frontiers in Plant Science
- Chloroplast DNA Structural Variation, Phylogeny, and Age of Divergence among Diploid Cotton Species
- (2016) Zhiwen Chen et al. PLoS One
- Re-evaluating the phylogeny of allopolyploid Gossypium L.
- (2015) Corrinne E. Grover et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution
- (2015) Fuguang Li et al. NATURE BIOTECHNOLOGY
- Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement
- (2015) Tianzhen Zhang et al. NATURE BIOTECHNOLOGY
- Gossypium anapoides(Malvaceae), a New Species from Western Australia
- (2015) James McD. Stewart et al. NOVON
- Gossypium barbadense genome sequence provides insight into the evolution of extra-long staple fiber and specialized metabolites
- (2015) Xia Liu et al. Scientific Reports
- The genome sequence of Sea-Island cotton (Gossypium barbadense) provides insights into the allopolyploidization and development of superior spinnable fibres
- (2015) Daojun Yuan et al. Scientific Reports
- A renaissance in herbal medicine identification: From morphology to DNA
- (2014) Shilin Chen et al. BIOTECHNOLOGY ADVANCES
- Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships
- (2014) Hui Huang et al. BMC EVOLUTIONARY BIOLOGY
- Model selection for ecologists: the worldviews of AIC and BIC
- (2014) Ken Aho et al. ECOLOGY
- The Translational Apparatus of Plastids and Its Role in Plant Development
- (2014) Nadine Tiller et al. Molecular Plant
- Genome sequence of the cultivated cotton Gossypium arboreum
- (2014) Fuguang Li et al. NATURE GENETICS
- Genetic diversity and population structure of cotton (Gossypium spp.) of the New World assessed by SSR markers
- (2013) Mauricio Ulloa et al. Botany
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—a baiting and iterative mapping approach
- (2013) Christoph Hahn et al. NUCLEIC ACIDS RESEARCH
- OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets
- (2013) Marc Lohse et al. NUCLEIC ACIDS RESEARCH
- The Complete Mitochondrial Genome of Gossypium hirsutum and Evolutionary Analysis of Higher Plant Mitochondrial Genomes
- (2013) Guozheng Liu et al. PLoS One
- Plastid Genome Sequence of a Wild Woody Oil Species, Prinsepia utilis, Provides Insights into Evolutionary and Mutational Patterns of Rosaceae Chloroplast Genomes
- (2013) Shuo Wang et al. PLoS One
- Polymorphic chloroplast microsatellite loci in Nelumbo (Nelumbonaceae)
- (2012) J. Xue et al. AMERICAN JOURNAL OF BOTANY
- Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres
- (2012) Andrew H. Paterson et al. NATURE
- The draft genome of a diploid cotton Gossypium raimondii
- (2012) Kunbo Wang et al. NATURE GENETICS
- Primer3—new capabilities and interfaces
- (2012) Andreas Untergasser et al. NUCLEIC ACIDS RESEARCH
- DAC Is Involved in the Accumulation of the Cytochrome b6/f Complex in Arabidopsis
- (2012) J. Xiao et al. PLANT PHYSIOLOGY
- NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data
- (2012) Ravi K. Patel et al. PLoS One
- Complete Chloroplast Genome Sequence of a Major Invasive Species, Crofton Weed (Ageratina adenophora)
- (2012) Xiaojun Nie et al. PLoS One
- Analysis of Complete Nucleotide Sequences of 12 Gossypium Chloroplast Genomes: Origin and Evolution of Allotetraploids
- (2012) Qin Xu et al. PLoS One
- MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
- (2011) K. Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- ATP Synthase Repression in Tobacco Restricts Photosynthetic Electron Transport, CO2Assimilation, and Plant Growth by Overacidification of the Thylakoid Lumen
- (2011) Markus Rott et al. PLANT CELL
- The evolution of the plastid chromosome in land plants: gene content, gene order, gene function
- (2011) Susann Wicke et al. PLANT MOLECULAR BIOLOGY
- High-Throughput Sequencing of Six Bamboo Chloroplast Genomes: Phylogenetic Implications for Temperate Woody Bamboos (Poaceae: Bambusoideae)
- (2011) Yun-Jie Zhang et al. PLoS One
- Recombination and the maintenance of plant organelle genome stability
- (2010) Alexandre Maréchal et al. NEW PHYTOLOGIST
- Increasing phylogenetic resolution at low taxonomic levels using massively parallel sequencing of chloroplast genomes
- (2009) Matthew Parks et al. BMC BIOLOGY
- Extensive Rearrangements in the Chloroplast Genome of Trachelium caeruleum Are Associated with Repeats and tRNA Genes
- (2008) Rosemarie C. Haberle et al. JOURNAL OF MOLECULAR EVOLUTION
- A Phylogenetic Analysis of Indel Dynamics in the Cotton Genus
- (2008) C. E. Grover et al. MOLECULAR BIOLOGY AND EVOLUTION
- Rpl33, a Nonessential Plastid-Encoded Ribosomal Protein in Tobacco, Is Required under Cold Stress Conditions
- (2008) M. Rogalski et al. PLANT CELL
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started