Comparison of Infant Gut and Skin Microbiota, Resistome and Virulome Between Neonatal Intensive Care Unit (NICU) Environments

Skin microbiome before development of atopic dermatitis: Early colonization with commensal staphylococci at 2 months is associated with a lower risk of atopic dermatitis at 1 year

(2017) Elizabeth A. Kennedy et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Development of the cutaneous microbiome in the preterm infant: A prospective longitudinal study

(2017) Mohan Pammi et al.   PLoS One

Bacterial colonization and succession in a newly opened hospital

(2017) Simon Lax et al.   Science Translational Medicine

Probabilistic Return-on-Investment Analysis of Single-Family Versus Open-Bay Rooms in Neonatal Intensive Care Units—Synthesis and Evaluation of Early Evidence on Nosocomial Infections, Length of Stay, and Direct Cost of Care

(2017) Hessam Sadatsafavi et al.   JOURNAL OF INTENSIVE CARE MEDICINE

Intestinal dysbiosis in preterm infants preceding necrotizing enterocolitis: a systematic review and meta-analysis

(2017) Mohan Pammi et al.   Microbiome

Sample size calculation while controlling false discovery rate for differential expression analysis with RNA-sequencing experiments

(2016) Ran Bi et al.   BMC BIOINFORMATICS

Cross-talk among flesh-eatingAeromonas hydrophilastrains in mixed infection leading to necrotizing fasciitis

(2016) Duraisamy Ponnusamy et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Developmental dynamics of the preterm infant gut microbiota and antibiotic resistome

(2016) Molly K. Gibson et al.   Nature Microbiology

Gut Microbiome Developmental Patterns in Early Life of Preterm Infants: Impacts of Feeding and Gender

(2016) Xiaomei Cong et al.   PLoS One

Gut microbiome and innate immune response patterns in IgE-associated eczema

(2015) C. E. West et al.   CLINICAL AND EXPERIMENTAL ALLERGY

Preterm infant gut colonization in the neonatal ICU and complete restoration 2 years later

(2015) L. Moles et al.   CLINICAL MICROBIOLOGY AND INFECTION

Comparison of DNA extraction methods for polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) analysis of the infant fecal microbial communities

(2014) Fan Wenguang et al.   African Journal of Microbiology Research

A comparison of the direct cost of care in an open-bay and single-family room NICU

(2014) D C Stevens et al.   Journal of Perinatology

A role for the gut microbiota in IBS

(2014) Stephen M. Collins   Nature Reviews Gastroenterology & Hepatology

Microbial Community Profiling of Human Saliva Using Shotgun Metagenomic Sequencing

(2014) Nur A. Hasan et al.   PLoS One

Patterned progression of bacterial populations in the premature infant gut

(2014) P. S. La Rosa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Longitudinal analysis of microbial interaction between humans and the indoor environment

(2014) S. Lax et al.   SCIENCE

Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants

(2014) Brandon Brooks et al.   Microbiome

Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders

(2013) Elaine Y. Hsiao et al.   CELL

Bacterial Diversity in Two Neonatal Intensive Care Units (NICUs)

(2013) Krissi M. Hewitt et al.   PLoS One

Bacterial Diversity in Meconium of Preterm Neonates and Evolution of Their Fecal Microbiota during the First Month of Life

(2013) Laura Moles et al.   PLoS One

Sensitization of Staphylococcus aureus to Methicillin and Other Antibiotics In Vitro and In Vivo in the Presence of HAMLET

(2013) Laura R. Marks et al.   PLoS One

House dust exposure mediates gut microbiome Lactobacillus enrichment and airway immune defense against allergens and virus infection

(2013) K. E. Fujimura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbiome Assembly across Multiple Body Sites in Low-Birthweight Infants

(2013) E. K. Costello et al.   mBio

Human gut microbiome viewed across age and geography

(2012) Tanya Yatsunenko et al.   NATURE

The gut microbiota in IBD

(2012) Chaysavanh Manichanh et al.   Nature Reviews Gastroenterology & Hepatology

Hypothesis Testing and Power Calculations for Taxonomic-Based Human Microbiome Data

(2012) Patricio S. La Rosa et al.   PLoS One

Assessment of intestinal microbiota of full-term breast-fed infants from two different geographical locations

(2011) Patricia Peso Echarri et al.   EARLY HUMAN DEVELOPMENT

Gut microbiome, obesity, and metabolic dysfunction

(2011) Herbert Tilg et al.   JOURNAL OF CLINICAL INVESTIGATION

Diversity of the Human Skin Microbiome Early in Life

(2011) Kimberly A. Capone et al.   JOURNAL OF INVESTIGATIVE DERMATOLOGY

A flexible R package for nonnegative matrix factorization

(2010) Renaud Gaujoux et al.   BMC BIOINFORMATICS

Comparative analysis of fecal DNA extraction methods with phylogenetic microarray: Effective recovery of bacterial and archaeal DNA using mechanical cell lysis

(2010) Anne Salonen et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Intestinal Microbiota of 6-week-old Infants Across Europe: Geographic Influence Beyond Delivery Mode, Breast-feeding, and Antibiotics

(2010) Matteo Fallani et al.   JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION

Documenting the NICU design dilemma: comparative patient progress in open-ward and single family room units

(2010) R Domanico et al.   Journal of Perinatology

The Stockholm Neonatal Family Centered Care Study: Effects on Length of Stay and Infant Morbidity

(2010) A. Ortenstrand et al.   PEDIATRICS

P1A Recombinant  -Lactamase Prevents Emergence of Antimicrobial Resistance in Gut Microflora of Healthy Subjects during Intravenous Administration of Ampicillin

(2009) A.-M. Tarkkanen et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Improved detection of microbial DNA after bead-beating before DNA isolation

(2009) Richard de Boer et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Reduced diversity in the early fecal microbiota of infants with atopic eczema

(2007) Mei Wang et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY