POWERDRESS-mediated histone deacetylation is essential for thermomorphogenesis in Arabidopsis thaliana

H2A.Z Represses Gene Expression by Modulating Promoter Nucleosome Structure and Enhancer Histone Modifications in Arabidopsis

(2017) Xiaozhuan Dai et al.   Molecular Plant

Transcriptional Regulation of the Ambient Temperature Response by H2A.Z Nucleosomes and HSF1 Transcription Factors in Arabidopsis

(2017) Sandra Cortijo et al.   Molecular Plant

Dual Role of the Histone Variant H2A.Z in Transcriptional Regulation of Stress-Response Genes

(2017) Weronika Sura et al.   PLANT CELL

SWR1 Chromatin-Remodeling Complex Subunits and H2A.Z Have Non-overlapping Functions in Immunity and Gene Regulation in Arabidopsis

(2016) Souha Berriri et al.   Molecular Plant

PIF4 Integrates Multiple Environmental and Hormonal Signals for Plant Growth Regulation in Arabidopsis

(2016) Hyunmo Choi et al.   MOLECULES AND CELLS

POWERDRESS and HDA9 interact and promote histone H3 deacetylation at specific genomic sites inArabidopsis

(2016) Yun Ju Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

POWERDRESS interacts with HISTONE DEACETYLASE 9 to promote aging in Arabidopsis

(2016) Xiangsong Chen et al.   eLife

Molecular and genetic control of plant thermomorphogenesis

(2016) Marcel Quint et al.   Nature Plants

Genetic Architecture of Natural Variation in Thermal Responses of Arabidopsis

(2015) Eduardo Sanchez-Bermejo et al.   PLANT PHYSIOLOGY

Histone chaperone Anp32e removes H2A.Z from DNA double-strand breaks and promotes nucleosome reorganization and DNA repair

(2015) Ozge Gursoy-Yuzugullu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Natural Variation Identifies ICARUS1, a Universal Gene Required for Cell Proliferation and Growth at High Temperatures in Arabidopsis thaliana

(2015) Wangsheng Zhu et al.   PLoS Genetics

The Hos2 Histone Deacetylase Controls Ustilago maydis Virulence through Direct Regulation of Mating-Type Genes

(2015) Alberto Elías-Villalobos et al.   PLoS Pathogens

Transcriptional Repression by Histone Deacetylases in Plants

(2014) Xuncheng Liu et al.   Molecular Plant

HISTONE DEACETYLASE 9 represses seedling traits inArabidopsis thalianadry seeds

(2014) Martijn van Zanten et al.   PLANT JOURNAL

Environmental responses mediated by histone variants

(2014) Paul B. Talbert et al.   TRENDS IN CELL BIOLOGY

Direct measurement of transcription rates reveals multiple mechanisms for configuration of the Arabidopsis ambient temperature response

(2014) Kate Sidaway-Lee et al.   GENOME BIOLOGY

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Histone variant Htz1 promotes histone H3 acetylation to enhance nucleotide excision repair in Htz1 nucleosomes

(2013) Yachuan Yu et al.   NUCLEIC ACIDS RESEARCH

A Histone Acetylation Switch Regulates H2A.Z Deposition by the SWR-C Remodeling Enzyme

(2013) S. Watanabe et al.   SCIENCE

POWERDRESS and Diversified Expression of the MIR172 Gene Family Bolster the Floral Stem Cell Network

(2013) Rae Eden Yumul et al.   PLoS Genetics

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

(2012) Evguenia Kopylova et al.   BIOINFORMATICS

Transcription factor PIF4 controls the thermosensory activation of flowering

(2012) S. Vinod Kumar et al.   NATURE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

High temperature acclimation through PIF4 signaling

(2012) Marcel C.G. Proveniers et al.   TRENDS IN PLANT SCIENCE

PIF4–Mediated Activation of YUCCA8 Expression Integrates Temperature into the Auxin Pathway in Regulating Arabidopsis Hypocotyl Growth

(2012) Jiaqiang Sun et al.   PLoS Genetics

Deposition of Histone Variant H2A.Z within Gene Bodies Regulates Responsive Genes

(2012) Devin Coleman-Derr et al.   PLoS Genetics

Genetic Analysis Implicates the Set3/Hos2 Histone Deacetylase in the Deposition and Remodeling of Nucleosomes Containing H2A.Z

(2011) M. Hang et al.   GENETICS

PHYTOCHROME-INTERACTING FACTOR 4 (PIF4) regulates auxin biosynthesis at high temperature

(2011) K. A. Franklin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The impact of temperature on balancing immune responsiveness and growth in Arabidopsis

(2011) Rubén Alcázar et al.   TRENDS IN PLANT SCIENCE

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

Genome-wide profiling of histone H3 lysine 9 acetylation and dimethylation in Arabidopsis reveals correlation between multiple histone marks and gene expression

(2010) Junli Zhou et al.   PLANT MOLECULAR BIOLOGY

Autoacetylation of the Ralstonia solanacearum Effector PopP2 Targets a Lysine Residue Essential for RRS1-R-Mediated Immunity in Arabidopsis

(2010) Céline Tasset et al.   PLoS Pathogens

H2A.Z-Containing Nucleosomes Mediate the Thermosensory Response in Arabidopsis

(2009) S. Vinod Kumar et al.   CELL

High Temperature-Mediated Adaptations in Plant Architecture Require the bHLH Transcription Factor PIF4

(2009) Maria A. Koini et al.   CURRENT BIOLOGY