Solving the RNA design problem with reinforcement learning

Mastering the game of Go without human knowledge

(2017) David Silver et al.   NATURE

Principles for Predicting RNA Secondary Structure Design Difficulty

(2016) Jeff Anderson-Lee et al.   JOURNAL OF MOLECULAR BIOLOGY

Complete RNA inverse folding: computational design of functional hammerhead ribozymes

(2014) Ivan Dotu et al.   NUCLEIC ACIDS RESEARCH

RNA design rules from a massive open laboratory

(2014) Jeehyung Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamics in Sequence Space for RNA Secondary Structure Design

(2012) Marco C. Matthies et al.   Journal of Chemical Theory and Computation

De novo design of a synthetic riboswitch that regulates transcription termination

(2012) M. Wachsmuth et al.   NUCLEIC ACIDS RESEARCH

ViennaRNA Package 2.0

(2011) Ronny Lorenz et al.   Algorithms for Molecular Biology

Organization of Intracellular Reactions with Rationally Designed RNA Assemblies

(2011) C. J. Delebecque et al.   SCIENCE

NUPACK: Analysis and design of nucleic acid systems

(2010) Joseph N. Zadeh et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Reengineering orthogonally selective riboswitches

(2010) N. Dixon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nanoparticle-mediated delivery of siRNA targeting Parp1 extends survival of mice bearing tumors derived from Brca1-deficient ovarian cancer cells

(2010) M. S. Goldberg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Higher-Order Cellular Information Processing with Synthetic RNA Devices

(2008) M. N. Win et al.   SCIENCE