Phase-lags in large scale brain synchronization: Methodological considerations and in-silico analysis

The Virtual Epileptic Patient: Individualized whole-brain models of epilepsy spread

(2017) V.K. Jirsa et al.   NEUROIMAGE

How do parcellation size and short-range connectivity affect dynamics in large-scale brain network models?

(2016) Timothée Proix et al.   NEUROIMAGE

How reliable are MEG resting-state connectivity metrics?

(2016) G.L. Colclough et al.   NEUROIMAGE

Alterations in the coupling functions between cortical and cardio-respiratory oscillations due to anaesthesia with propofol and sevoflurane

(2016) Tomislav Stankovski et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

The Kuramoto model in complex networks

(2016) Francisco A. Rodrigues et al.   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

Reconstructing Time-Dependent Dynamics

(2016) Philip Clemson et al.   PROCEEDINGS OF THE IEEE

Modeling of Large-Scale Functional Brain Networks Based on Structural Connectivity from DTI: Comparison with EEG Derived Phase Coupling Networks and Evaluation of Alternative Methods along the Modeling Path

(2016) Holger Finger et al.   PLoS Computational Biology

Estimation of Directed Effective Connectivity from fMRI Functional Connectivity Hints at Asymmetries of Cortical Connectome

(2016) Matthieu Gilson et al.   PLoS Computational Biology

Mathematical framework for large-scale brain network modeling in The Virtual Brain

(2015) Paula Sanz-Leon et al.   NEUROIMAGE

Resting-State Temporal Synchronization Networks Emerge from Connectivity Topology and Heterogeneity

(2015) Adrián Ponce-Alvarez et al.   PLoS Computational Biology

Glassy states and super-relaxation in populations of coupled phase oscillators

(2014) D. Iatsenko et al.   Nature Communications

Mechanisms of Zero-Lag Synchronization in Cortical Motifs

(2014) Leonardo L. Gollo et al.   PLoS Computational Biology

Which fMRI clustering gives good brain parcellations?

(2014) Bertrand Thirion et al.   Frontiers in Neuroscience

Resting-State Functional Connectivity Emerges from Structurally and Dynamically Shaped Slow Linear Fluctuations

(2013) G. Deco et al.   JOURNAL OF NEUROSCIENCE

The WU-Minn Human Connectome Project: An overview

(2013) David C. Van Essen et al.   NEUROIMAGE

Exploring mechanisms of spontaneous functional connectivity in MEG: How delayed network interactions lead to structured amplitude envelopes of band-pass filtered oscillations

(2013) Joana Cabral et al.   NEUROIMAGE

Characterizing an ensemble of interacting oscillators: The mean-field variability index

(2013) L. W. Sheppard et al.   PHYSICAL REVIEW E

Mean-field and mean-ensemble frequencies of a system of coupled oscillators

(2013) Spase Petkoski et al.   PHYSICAL REVIEW E

Chronotaxic Systems: A New Class of Self-Sustained Nonautonomous Oscillators

(2013) Yevhen F. Suprunenko et al.   PHYSICAL REVIEW LETTERS

Oscillation quenching mechanisms: Amplitude vs. oscillation death

(2013) Aneta Koseska et al.   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

MRtrix: Diffusion tractography in crossing fiber regions

(2012) J-Donald Tournier et al.   INTERNATIONAL JOURNAL OF IMAGING SYSTEMS AND TECHNOLOGY

Go with the flow: Use of a directed phase lag index (dPLI) to characterize patterns of phase relations in a large-scale model of brain dynamics

(2012) C.J. Stam et al.   NEUROIMAGE

Modeling the outcome of structural disconnection on resting-state functional connectivity

(2012) Joana Cabral et al.   NEUROIMAGE

Kuramoto model with time-varying parameters

(2012) Spase Petkoski et al.   PHYSICAL REVIEW E

Inference of Time-Evolving Coupled Dynamical Systems in the Presence of Noise

(2012) Tomislav Stankovski et al.   PHYSICAL REVIEW LETTERS

Information Flow in Networks and the Law of Diminishing Marginal Returns: Evidence from Modeling and Human Electroencephalographic Recordings

(2012) Daniele Marinazzo et al.   PLoS One

Discovering oscillatory interaction networks with M/EEG: challenges and breakthroughs

(2012) Satu Palva et al.   TRENDS IN COGNITIVE SCIENCES

Activity Dependent Degeneration Explains Hub Vulnerability in Alzheimer's Disease

(2012) Willem de Haan et al.   PLoS Computational Biology

Role of local network oscillations in resting-state functional connectivity

(2011) Joana Cabral et al.   NEUROIMAGE

An improved index of phase-synchronization for electrophysiological data in the presence of volume-conduction, noise and sample-size bias

(2011) Martin Vinck et al.   NEUROIMAGE

Structural and functional networks in complex systems with delay

(2011) Víctor M. Eguíluz et al.   PHYSICAL REVIEW E

Phase description of spiking neuron networks with global electric and synaptic coupling

(2011) Dipanjan Roy et al.   PHYSICAL REVIEW E

Kuramoto Model of Coupled Oscillators with Positive and Negative Coupling Parameters: An Example of Conformist and Contrarian Oscillators

(2011) Hyunsuk Hong et al.   PHYSICAL REVIEW LETTERS

Generative Models of Cortical Oscillations: Neurobiological Implications of the Kuramoto Model

(2010) Michael Breakspear et al.   Frontiers in Human Neuroscience

MR connectomics: Principles and challenges

(2010) Patric Hagmann et al.   JOURNAL OF NEUROSCIENCE METHODS

Using Diffusion Imaging to Study Human Connectional Anatomy

(2009) Heidi Johansen-Berg et al.   Annual Review of Neuroscience

Complex network measures of brain connectivity: Uses and interpretations

(2009) Mikail Rubinov et al.   NEUROIMAGE

Delays and weakly coupled neuronal oscillators

(2009) B. Ermentrout et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Neural field dynamics with local and global connectivity and time delay

(2009) V. K Jirsa   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES

Large Coupled Oscillator Systems with Heterogeneous Interaction Delays

(2009) Wai Shing Lee et al.   PHYSICAL REVIEW LETTERS

Key role of coupling, delay, and noise in resting brain fluctuations

(2009) G. Deco et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Neuronal Synchrony during Anesthesia: A Thalamocortical Model

(2008) Jane H. Sheeba et al.   BIOPHYSICAL JOURNAL

Dynamical consequences of lesions in cortical networks

(2008) Christopher J. Honey et al.   HUMAN BRAIN MAPPING

Synchronization in complex networks

(2008) Alex Arenas et al.   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

Noise during Rest Enables the Exploration of the Brain's Dynamic Repertoire

(2008) Anandamohan Ghosh et al.   PLoS Computational Biology