Influence of fecal collection conditions and 16S rRNA gene sequencing at two centers on human gut microbiota analysis
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Title
Influence of fecal collection conditions and 16S rRNA gene sequencing at two centers on human gut microbiota analysis
Authors
Keywords
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Journal
Scientific Reports
Volume 8, Issue 1, Pages -
Publisher
Springer Nature
Online
2018-03-07
DOI
10.1038/s41598-018-22491-7
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- (2011) Robert C. Edgar et al. BIOINFORMATICS
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