Microbiota Composition May Predict Anti-Tnf Alpha Response in Spondyloarthritis Patients: an Exploratory Study

Gut microbiome influences efficacy of PD-1–based immunotherapy against epithelial tumors

(2017) Bertrand Routy et al.   SCIENCE

Subclinical gut inflammation in ankylosing spondylitis

(2016) Francesco Ciccia et al.   CURRENT OPINION IN RHEUMATOLOGY

Anti-TNF Therapy Response in Patients with Ulcerative Colitis Is Associated with Colonic Antimicrobial Peptide Expression and Microbiota Composition

(2016) Maria K. Magnusson et al.   Journal of Crohns & Colitis

Gut microbiota imbalance and colorectal cancer

(2016) Johan Gagnière   WORLD JOURNAL OF GASTROENTEROLOGY

Intestinal microbiome analyses identify melanoma patients at risk for checkpoint-blockade-induced colitis

(2016) Krista Dubin et al.   Nature Communications

Brief Report:Dialisteras a Microbial Marker of Disease Activity in Spondyloarthritis

(2016) Raul Y. Tito et al.   Arthritis & Rheumatology

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

The intestinal microbiome in human disease and how it relates to arthritis and spondyloarthritis

(2015) Mary-Ellen Costello et al.   BEST PRACTICE & RESEARCH IN CLINICAL RHEUMATOLOGY

Anti-tumour Necrosis Factor Treatment with Adalimumab Induces Changes in the Microbiota of Crohn’s Disease

(2015) David Busquets et al.   Journal of Crohns & Colitis

The oral and gut microbiomes are perturbed in rheumatoid arthritis and partly normalized after treatment

(2015) Xuan Zhang et al.   NATURE MEDICINE

Microbiome reflects status of RA and response to therapy

(2015) Robert Phillips   Nature Reviews Rheumatology

Genetics of ankylosing spondylitis—insights into pathogenesis

(2015) Matthew A. Brown et al.   Nature Reviews Rheumatology

The impact of biological therapy on regulatory T cells in rheumatoid arthritis

(2015) R. Byng-Maddick et al.   RHEUMATOLOGY

Commensal Bifidobacterium promotes antitumor immunity and facilitates anti-PD-L1 efficacy

(2015) A. Sivan et al.   SCIENCE

The ecology of the microbiome: Networks, competition, and stability

(2015) K. Z. Coyte et al.   SCIENCE

Anticancer immunotherapy by CTLA-4 blockade relies on the gut microbiota

(2015) M. Vetizou et al.   SCIENCE

Cancer and the microbiota

(2015) W. S. Garrett   SCIENCE

Proteobacteria: microbial signature of dysbiosis in gut microbiota

(2015) Na-Ri Shin et al.   TRENDS IN BIOTECHNOLOGY

Brief Report: Intestinal Dysbiosis in Ankylosing Spondylitis

(2015) Mary-Ellen Costello et al.   Arthritis & Rheumatology

Relevance of the gut/joint axis for the management of spondyloarthritis in daily clinical practice

(2014) Heleen Cypers et al.   CURRENT OPINION IN RHEUMATOLOGY

TNF and TNF-receptors: From mediators of cell death and inflammation to therapeutic giants – past, present and future

(2014) Lisa M. Sedger et al.   CYTOKINE & GROWTH FACTOR REVIEWS

Local and Systemic Immune Mechanisms Underlying the Anti-Colitis Effects of the Dairy Bacterium Lactobacillus delbrueckii

(2014) Clarissa Santos Rocha et al.   PLoS One

HLA-B27 and Human β2-Microglobulin Affect the Gut Microbiota of Transgenic Rats

(2014) Phoebe Lin et al.   PLoS One

Altered microbiota associated with abnormal humoral immune responses to commensal organisms in enthesitis-related arthritis

(2014) Matthew L Stoll et al.   ARTHRITIS RESEARCH & THERAPY

Further Steps in TANGO: improved taxonomic assignment in metagenomics

(2013) D. Alonso-Alemany et al.   BIOINFORMATICS

The Link between Ankylosing Spondylitis, Crohn’s Disease,Klebsiella, and Starch Consumption

(2013) Taha Rashid et al.   Clinical & Developmental Immunology

Incidence of Spondyloarthropathy in Patients with Ulcerative Colitis: A Population-based Study

(2013) R. Shivashankar et al.   JOURNAL OF RHEUMATOLOGY

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Commensal Bacteria Control Cancer Response to Therapy by Modulating the Tumor Microenvironment

(2013) N. Iida et al.   SCIENCE

Nonredundant Function of Soluble LT 3 Produced by Innate Lymphoid Cells in Intestinal Homeostasis

(2013) A. A. Kruglov et al.   SCIENCE

The Impact of the Gut Microbiota on Human Health: An Integrative View

(2012) Jose C. Clemente et al.   CELL

Incidence of Spondyloarthropathy in Patients with Crohn's Disease: A Population-based Study

(2012) R. SHIVASHANKAR et al.   JOURNAL OF RHEUMATOLOGY

The transition of acute to chronic bowel inflammation in spondyloarthritis

(2012) Liesbet Van Praet et al.   Nature Reviews Rheumatology

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

DECIPHER, a Search-Based Approach to Chimera Identification for 16S rRNA Sequences

(2011) Erik S. Wright et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pyrosequencing-Based Analysis of the Mucosal Microbiota in Healthy Individuals Reveals Ubiquitous Bacterial Groups and Micro-Heterogeneity

(2011) Pei-Ying Hong et al.   PLoS One

Baseline predictors of response and discontinuation of tumor necrosis factor-alpha blocking therapy in ankylosing spondylitis: a prospective longitudinal observational cohort study

(2011) Suzanne Arends et al.   ARTHRITIS RESEARCH & THERAPY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Gram-Negative Bacterial Sensors for Eukaryotic Signal Molecules

(2009) Olivier Lesouhaitier et al.   SENSORS

Inter-kingdom signalling: communication between bacteria and their hosts

(2008) David T. Hughes et al.   NATURE REVIEWS MICROBIOLOGY

Tumor necrosis factor antagonist mechanisms of action: A comprehensive review

(2007) Daniel Tracey et al.   PHARMACOLOGY & THERAPEUTICS