The Molecular Basis of the Sodium Dodecyl Sulfate Effect on Human Ubiquitin Structure: A Molecular Dynamics Simulation Study

Secondary Structural Changes of Intact and Disulfide Bridges-Cleaved Human Serum Albumins in Thermal Denaturation up to 130°C – Additive Effects of Sodium Dodecyl Sulfate on the Changes

(2017) Yoshiko Moriyama et al.   Journal of Oleo Science

SDS induced dissociation of STY3178 oligomer: experimental and molecular dynamics studies

(2017) Paramita Saha et al.   RSC Advances

Molecular basis of Lys11-polyubiquitin specificity in the deubiquitinase Cezanne

(2016) Tycho E. T. Mevissen et al.   NATURE

Ubiquitin-dependent folding of the Wnt signaling coreceptor LRP6

(2016) Elsa Perrody et al.   eLife

Molecular Insight into Human Lysozyme and Its Ability to Form Amyloid Fibrils in High Concentrations of Sodium Dodecyl Sulfate: A View from Molecular Dynamics Simulations

(2016) Majid Jafari et al.   PLoS One

Proteins in a brave new surfactant world

(2015) Daniel E. Otzen   CURRENT OPINION IN COLLOID & INTERFACE SCIENCE

Sodium dodecyl sulphate (SDS) induced changes in propensity and kinetics of α-lactalbumin fibrillation

(2015) E. Kiran Kumar et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Structural Aspects of a Protein–Surfactant Assembly: Native and Reduced States of Human Serum Albumin

(2015) Uttam Anand et al.   PROTEIN JOURNAL

g_mmpbsa—A GROMACS Tool for High-Throughput MM-PBSA Calculations

(2014) Rashmi Kumari et al.   Journal of Chemical Information and Modeling

Differential effects of ionic and non-ionic surfactants on lysozyme fibrillation

(2014) E. Kiran Kumar et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Protonation favors aggregation of lysozyme with SDS

(2014) Javed M. Khan et al.   Soft Matter

GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit

(2013) Sander Pronk et al.   BIOINFORMATICS

SDS Can Be Utilized as an Amyloid Inducer: A Case Study on Diverse Proteins

(2012) Javed Masood Khan et al.   PLoS One

Effect of protein–surfactant interactions on aggregation of β-lactoglobulin

(2011) Jon G. Hansted et al.   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

Protein–surfactant interactions: A tale of many states

(2011) Daniel Otzen   BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS

An Automated Force Field Topology Builder (ATB) and Repository: Version 1.0

(2011) Alpeshkumar K. Malde et al.   Journal of Chemical Theory and Computation

Protein–Surfactant Interaction: Sodium Dodecyl Sulfate-Induced Unfolding of Ribonuclease A

(2011) K. Tejaswi Naidu et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Complexes of Native Ubiquitin and Dodecyl Sulfate Illustrate the Nature of Hydrophobic and Electrostatic Interactions in the Binding of Proteins and Surfactants

(2011) Bryan F. Shaw et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Investigating the effects of sodium dodecyl sulfate on the aggregative behavior of hen egg-white lysozyme at acidic pH

(2010) Ying-Tz Hung et al.   COLLOIDS AND SURFACES B-BIOINTERFACES

Spectroscopic Probing of the Microenvironment in a Protein−Surfactant Assembly

(2010) Uttam Anand et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Differential Phospholipid Binding of α-Synuclein Variants Implicated in Parkinson’s Disease Revealed by Solution NMR Spectroscopy

(2009) Christina R. Bodner et al.   BIOCHEMISTRY

The First N-terminal Amino Acids of α-Synuclein Are Essential for α-Helical Structure Formation In Vitro and Membrane Binding in Yeast

(2009) Katherina Vamvaca et al.   JOURNAL OF MOLECULAR BIOLOGY

Multiple Tight Phospholipid-Binding Modes of α-Synuclein Revealed by Solution NMR Spectroscopy

(2009) Christina R. Bodner et al.   JOURNAL OF MOLECULAR BIOLOGY

Stable intermediates determine proteins' primary unfolding sites in the presence of surfactants

(2008) Jonas Høeg Hansen et al.   BIOPOLYMERS

Surfactant-induced conformational transition of amyloid β-peptide

(2008) N. Sureshbabu et al.   EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS

GROMACS 4:  Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

(2008) Berk Hess et al.   Journal of Chemical Theory and Computation

α-Lactalbumin is unfolded by all classes of surfactants but by different mechanisms

(2008) Daniel E. Otzen et al.   JOURNAL OF COLLOID AND INTERFACE SCIENCE

Thickness of the Hydration Layer of a Protein from Molecular Dynamics Simulation

(2008) Sudipta Kumar Sinha et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Pathway for Unfolding of Ubiquitin in Sodium Dodecyl Sulfate, Studied by Capillary Electrophoresis

(2008) Grégory F. Schneider et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY